Gene : Lsat_1_v5_gn_9_117961 L. sativa V8

Defline:  (1 of 1) 2.1.1.214 - tRNA (guanine(10)-N(2))-methyltransferase Genomic Order:  3679
Name:  ? Lsat_1_v5_gn_9_117961 Secondary Identifier:  ? PAC:38926842

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-6829 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_117961 0.5kb upstream 0.5kb upstream 2741   true Lsat_1_v8_lg_9: 191285121-191287861 Lactuca sativa
Lsat_1_v5_gn_9_117961 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 191285121-191285620 Lactuca sativa
Lsat_1_v5_gn_9_117961 0.5kb downstream 0.5kb downstream 2741   true Lsat_1_v8_lg_9: 191285621-191288361 Lactuca sativa
Lsat_1_v5_gn_9_117961 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 191287862-191288361 Lactuca sativa
Lsat_1_v5_gn_9_117961 1.0kb upstream 1.0kb upstream 3241   true Lsat_1_v8_lg_9: 191284621-191287861 Lactuca sativa
Lsat_1_v5_gn_9_117961 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 191284621-191285620 Lactuca sativa
Lsat_1_v5_gn_9_117961 1.0kb downstream 1.0kb downstream 3241   true Lsat_1_v8_lg_9: 191285621-191288861 Lactuca sativa
Lsat_1_v5_gn_9_117961 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 191287862-191288861 Lactuca sativa
Lsat_1_v5_gn_9_117961 2.0kb upstream 2.0kb upstream 4241   true Lsat_1_v8_lg_9: 191283621-191287861 Lactuca sativa
Lsat_1_v5_gn_9_117961 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 191283621-191285620 Lactuca sativa
Lsat_1_v5_gn_9_117961 2.0kb downstream 2.0kb downstream 4241   true Lsat_1_v8_lg_9: 191285621-191289861 Lactuca sativa
Lsat_1_v5_gn_9_117961 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 191287862-191289861 Lactuca sativa
Lsat_1_v5_gn_9_117961 5.0kb upstream 5.0kb upstream 7241   true Lsat_1_v8_lg_9: 191280621-191287861 Lactuca sativa
Lsat_1_v5_gn_9_117961 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 191280621-191285620 Lactuca sativa
Lsat_1_v5_gn_9_117961 5.0kb downstream 5.0kb downstream 7241   true Lsat_1_v8_lg_9: 191285621-191292861 Lactuca sativa
Lsat_1_v5_gn_9_117961 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 191287862-191292861 Lactuca sativa
Lsat_1_v5_gn_9_117961 10.0kb upstream 10.0kb upstream 12241   true Lsat_1_v8_lg_9: 191275621-191287861 Lactuca sativa
Lsat_1_v5_gn_9_117961 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 191275621-191285620 Lactuca sativa
Lsat_1_v5_gn_9_117961 10.0kb downstream 10.0kb downstream 12241   true Lsat_1_v8_lg_9: 191285621-191297861 Lactuca sativa
Lsat_1_v5_gn_9_117961 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 191287862-191297861 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470495 5263 Asterids View MSA
123738561 5271 Pentapetalae View MSA
122788498 5272 Eudicot View MSA
122048014 5273 Angiosperm View MSA
121347099 5274 Embryophyte View MSA
123424311 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain