Gene : Lsat_1_v5_gn_9_118621 L. sativa V8
Defline:  (1 of 2) 2.1.2.10 - Aminomethyltransferase / Tetrahydrofolate aminomethyltransferase Genomic Order:  3740
Name:  ? Lsat_1_v5_gn_9_118621 Secondary Identifier:  ? PAC:38926725
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa GLYCLEAV-PWY Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_118621 0.5kb upstream 0.5kb upstream 3507   true Lsat_1_v8_lg_9: 194396837-194400343 Lactuca sativa
Lsat_1_v5_gn_9_118621 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 194396837-194397336 Lactuca sativa
Lsat_1_v5_gn_9_118621 0.5kb downstream 0.5kb downstream 3507   true Lsat_1_v8_lg_9: 194397337-194400843 Lactuca sativa
Lsat_1_v5_gn_9_118621 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 194400344-194400843 Lactuca sativa
Lsat_1_v5_gn_9_118621 1.0kb upstream 1.0kb upstream 4007   true Lsat_1_v8_lg_9: 194396337-194400343 Lactuca sativa
Lsat_1_v5_gn_9_118621 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 194396337-194397336 Lactuca sativa
Lsat_1_v5_gn_9_118621 1.0kb downstream 1.0kb downstream 4007   true Lsat_1_v8_lg_9: 194397337-194401343 Lactuca sativa
Lsat_1_v5_gn_9_118621 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 194400344-194401343 Lactuca sativa
Lsat_1_v5_gn_9_118621 2.0kb upstream 2.0kb upstream 5007   true Lsat_1_v8_lg_9: 194395337-194400343 Lactuca sativa
Lsat_1_v5_gn_9_118621 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 194395337-194397336 Lactuca sativa
Lsat_1_v5_gn_9_118621 2.0kb downstream 2.0kb downstream 5007   true Lsat_1_v8_lg_9: 194397337-194402343 Lactuca sativa
Lsat_1_v5_gn_9_118621 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 194400344-194402343 Lactuca sativa
Lsat_1_v5_gn_9_118621 5.0kb upstream 5.0kb upstream 8007   true Lsat_1_v8_lg_9: 194392337-194400343 Lactuca sativa
Lsat_1_v5_gn_9_118621 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 194392337-194397336 Lactuca sativa
Lsat_1_v5_gn_9_118621 5.0kb downstream 5.0kb downstream 8007   true Lsat_1_v8_lg_9: 194397337-194405343 Lactuca sativa
Lsat_1_v5_gn_9_118621 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 194400344-194405343 Lactuca sativa
Lsat_1_v5_gn_9_118621 10.0kb upstream 10.0kb upstream 13007   true Lsat_1_v8_lg_9: 194387337-194400343 Lactuca sativa
Lsat_1_v5_gn_9_118621 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 194387337-194397336 Lactuca sativa
Lsat_1_v5_gn_9_118621 10.0kb downstream 10.0kb downstream 13007   true Lsat_1_v8_lg_9: 194397337-194410343 Lactuca sativa
Lsat_1_v5_gn_9_118621 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 194400344-194410343 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467007 5263 Asterids View MSA
123736787 5271 Pentapetalae View MSA
122786852 5272 Eudicot View MSA
122044348 5273 Angiosperm View MSA
121345133 5274 Embryophyte View MSA
123423881 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain