Gene : Lsat_1_v5_gn_9_121981 L. sativa V8
Defline:  (1 of 1) K11808 - phosphoribosylaminoimidazole carboxylase (ADE2) Genomic Order:  3827
Name:  ? Lsat_1_v5_gn_9_121981 Secondary Identifier:  ? PAC:38924659
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-6124 Lactuca sativa pathologic  
Lsativa PWY-841 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_121981 0.5kb upstream 0.5kb upstream 5492   true Lsat_1_v8_lg_9: 198011636-198017127 Lactuca sativa
Lsat_1_v5_gn_9_121981 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 198011636-198012135 Lactuca sativa
Lsat_1_v5_gn_9_121981 0.5kb downstream 0.5kb downstream 5492   true Lsat_1_v8_lg_9: 198012136-198017627 Lactuca sativa
Lsat_1_v5_gn_9_121981 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 198017128-198017627 Lactuca sativa
Lsat_1_v5_gn_9_121981 1.0kb upstream 1.0kb upstream 5992   true Lsat_1_v8_lg_9: 198011136-198017127 Lactuca sativa
Lsat_1_v5_gn_9_121981 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 198011136-198012135 Lactuca sativa
Lsat_1_v5_gn_9_121981 1.0kb downstream 1.0kb downstream 5992   true Lsat_1_v8_lg_9: 198012136-198018127 Lactuca sativa
Lsat_1_v5_gn_9_121981 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 198017128-198018127 Lactuca sativa
Lsat_1_v5_gn_9_121981 2.0kb upstream 2.0kb upstream 6992   true Lsat_1_v8_lg_9: 198010136-198017127 Lactuca sativa
Lsat_1_v5_gn_9_121981 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 198010136-198012135 Lactuca sativa
Lsat_1_v5_gn_9_121981 2.0kb downstream 2.0kb downstream 6992   true Lsat_1_v8_lg_9: 198012136-198019127 Lactuca sativa
Lsat_1_v5_gn_9_121981 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 198017128-198019127 Lactuca sativa
Lsat_1_v5_gn_9_121981 5.0kb upstream 5.0kb upstream 9992   true Lsat_1_v8_lg_9: 198007136-198017127 Lactuca sativa
Lsat_1_v5_gn_9_121981 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 198007136-198012135 Lactuca sativa
Lsat_1_v5_gn_9_121981 5.0kb downstream 5.0kb downstream 9992   true Lsat_1_v8_lg_9: 198012136-198022127 Lactuca sativa
Lsat_1_v5_gn_9_121981 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 198017128-198022127 Lactuca sativa
Lsat_1_v5_gn_9_121981 10.0kb upstream 10.0kb upstream 14992   true Lsat_1_v8_lg_9: 198002136-198017127 Lactuca sativa
Lsat_1_v5_gn_9_121981 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 198002136-198012135 Lactuca sativa
Lsat_1_v5_gn_9_121981 10.0kb downstream 10.0kb downstream 14992   true Lsat_1_v8_lg_9: 198012136-198027127 Lactuca sativa
Lsat_1_v5_gn_9_121981 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 198017128-198027127 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468469 5263 Asterids View MSA
123748384 5271 Pentapetalae View MSA
122790389 5272 Eudicot View MSA
122043847 5273 Angiosperm View MSA
121345366 5274 Embryophyte View MSA
123425127 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain