Gene : Lsat_1_v5_gn_9_121880 L. sativa V8
Defline:  (1 of 1) PF04795 - PAPA-1-like conserved region (PAPA-1) Genomic Order:  3817
Name:  ? Lsat_1_v5_gn_9_121880 Secondary Identifier:  ? PAC:38927092
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_121880 0.5kb upstream 0.5kb upstream 4032   true Lsat_1_v8_lg_9: 197085311-197089342 Lactuca sativa
Lsat_1_v5_gn_9_121880 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 197085311-197085810 Lactuca sativa
Lsat_1_v5_gn_9_121880 0.5kb downstream 0.5kb downstream 4032   true Lsat_1_v8_lg_9: 197085811-197089842 Lactuca sativa
Lsat_1_v5_gn_9_121880 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 197089343-197089842 Lactuca sativa
Lsat_1_v5_gn_9_121880 1.0kb upstream 1.0kb upstream 4532   true Lsat_1_v8_lg_9: 197084811-197089342 Lactuca sativa
Lsat_1_v5_gn_9_121880 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 197084811-197085810 Lactuca sativa
Lsat_1_v5_gn_9_121880 1.0kb downstream 1.0kb downstream 4532   true Lsat_1_v8_lg_9: 197085811-197090342 Lactuca sativa
Lsat_1_v5_gn_9_121880 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 197089343-197090342 Lactuca sativa
Lsat_1_v5_gn_9_121880 2.0kb upstream 2.0kb upstream 5532   true Lsat_1_v8_lg_9: 197083811-197089342 Lactuca sativa
Lsat_1_v5_gn_9_121880 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 197083811-197085810 Lactuca sativa
Lsat_1_v5_gn_9_121880 2.0kb downstream 2.0kb downstream 5532   true Lsat_1_v8_lg_9: 197085811-197091342 Lactuca sativa
Lsat_1_v5_gn_9_121880 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 197089343-197091342 Lactuca sativa
Lsat_1_v5_gn_9_121880 5.0kb upstream 5.0kb upstream 8532   true Lsat_1_v8_lg_9: 197080811-197089342 Lactuca sativa
Lsat_1_v5_gn_9_121880 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 197080811-197085810 Lactuca sativa
Lsat_1_v5_gn_9_121880 5.0kb downstream 5.0kb downstream 8532   true Lsat_1_v8_lg_9: 197085811-197094342 Lactuca sativa
Lsat_1_v5_gn_9_121880 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 197089343-197094342 Lactuca sativa
Lsat_1_v5_gn_9_121880 10.0kb upstream 10.0kb upstream 13532   true Lsat_1_v8_lg_9: 197075811-197089342 Lactuca sativa
Lsat_1_v5_gn_9_121880 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 197075811-197085810 Lactuca sativa
Lsat_1_v5_gn_9_121880 10.0kb downstream 10.0kb downstream 13532   true Lsat_1_v8_lg_9: 197085811-197099342 Lactuca sativa
Lsat_1_v5_gn_9_121880 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 197089343-197099342 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041502 5273 Angiosperm View MSA
121476365 5263 Asterids View MSA
123742118 5271 Pentapetalae View MSA
122796664 5272 Eudicot View MSA
121348202 5274 Embryophyte View MSA
123380771 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain