Gene : Lsat_1_v5_gn_9_122521 L. sativa V8
Defline:  (1 of 24) PF07816 - Protein of unknown function (DUF1645) (DUF1645) Genomic Order:  3838
Name:  ? Lsat_1_v5_gn_9_122521 Secondary Identifier:  ? PAC:38923081
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_122521 0.5kb upstream 0.5kb upstream 3235   true Lsat_1_v8_lg_9: 198749571-198752805 Lactuca sativa
Lsat_1_v5_gn_9_122521 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 198752306-198752805 Lactuca sativa
Lsat_1_v5_gn_9_122521 0.5kb downstream 0.5kb downstream 3235   true Lsat_1_v8_lg_9: 198749071-198752305 Lactuca sativa
Lsat_1_v5_gn_9_122521 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 198749071-198749570 Lactuca sativa
Lsat_1_v5_gn_9_122521 1.0kb upstream 1.0kb upstream 3735   true Lsat_1_v8_lg_9: 198749571-198753305 Lactuca sativa
Lsat_1_v5_gn_9_122521 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 198752306-198753305 Lactuca sativa
Lsat_1_v5_gn_9_122521 1.0kb downstream 1.0kb downstream 3735   true Lsat_1_v8_lg_9: 198748571-198752305 Lactuca sativa
Lsat_1_v5_gn_9_122521 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 198748571-198749570 Lactuca sativa
Lsat_1_v5_gn_9_122521 2.0kb upstream 2.0kb upstream 4735   true Lsat_1_v8_lg_9: 198749571-198754305 Lactuca sativa
Lsat_1_v5_gn_9_122521 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 198752306-198754305 Lactuca sativa
Lsat_1_v5_gn_9_122521 2.0kb downstream 2.0kb downstream 4735   true Lsat_1_v8_lg_9: 198747571-198752305 Lactuca sativa
Lsat_1_v5_gn_9_122521 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 198747571-198749570 Lactuca sativa
Lsat_1_v5_gn_9_122521 5.0kb upstream 5.0kb upstream 7735   true Lsat_1_v8_lg_9: 198749571-198757305 Lactuca sativa
Lsat_1_v5_gn_9_122521 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 198752306-198757305 Lactuca sativa
Lsat_1_v5_gn_9_122521 5.0kb downstream 5.0kb downstream 7735   true Lsat_1_v8_lg_9: 198744571-198752305 Lactuca sativa
Lsat_1_v5_gn_9_122521 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 198744571-198749570 Lactuca sativa
Lsat_1_v5_gn_9_122521 10.0kb upstream 10.0kb upstream 12735   true Lsat_1_v8_lg_9: 198749571-198762305 Lactuca sativa
Lsat_1_v5_gn_9_122521 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 198752306-198762305 Lactuca sativa
Lsat_1_v5_gn_9_122521 10.0kb downstream 10.0kb downstream 12735   true Lsat_1_v8_lg_9: 198739571-198752305 Lactuca sativa
Lsat_1_v5_gn_9_122521 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 198739571-198749570 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467391 5263 Asterids View MSA
123751104 5271 Pentapetalae View MSA
122786084 5272 Eudicot View MSA
122047451 5273 Angiosperm View MSA
121350053 5274 Embryophyte View MSA
123381556 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain