Gene : Lsat_1_v5_gn_9_124081 L. sativa V8
Defline:  (1 of 4) PF04588 - Hypoxia induced protein conserved region (HIG_1_N) Genomic Order:  3907
Name:  ? Lsat_1_v5_gn_9_124081 Secondary Identifier:  ? PAC:38922547
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_124081 0.5kb upstream 0.5kb upstream 1674   true Lsat_1_v8_lg_9: 203927228-203928901 Lactuca sativa
Lsat_1_v5_gn_9_124081 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 203927228-203927727 Lactuca sativa
Lsat_1_v5_gn_9_124081 0.5kb downstream 0.5kb downstream 1674   true Lsat_1_v8_lg_9: 203927728-203929401 Lactuca sativa
Lsat_1_v5_gn_9_124081 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 203928902-203929401 Lactuca sativa
Lsat_1_v5_gn_9_124081 1.0kb upstream 1.0kb upstream 2174   true Lsat_1_v8_lg_9: 203926728-203928901 Lactuca sativa
Lsat_1_v5_gn_9_124081 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 203926728-203927727 Lactuca sativa
Lsat_1_v5_gn_9_124081 1.0kb downstream 1.0kb downstream 2174   true Lsat_1_v8_lg_9: 203927728-203929901 Lactuca sativa
Lsat_1_v5_gn_9_124081 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 203928902-203929901 Lactuca sativa
Lsat_1_v5_gn_9_124081 2.0kb upstream 2.0kb upstream 3174   true Lsat_1_v8_lg_9: 203925728-203928901 Lactuca sativa
Lsat_1_v5_gn_9_124081 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 203925728-203927727 Lactuca sativa
Lsat_1_v5_gn_9_124081 2.0kb downstream 2.0kb downstream 3174   true Lsat_1_v8_lg_9: 203927728-203930901 Lactuca sativa
Lsat_1_v5_gn_9_124081 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 203928902-203930901 Lactuca sativa
Lsat_1_v5_gn_9_124081 5.0kb upstream 5.0kb upstream 6174   true Lsat_1_v8_lg_9: 203922728-203928901 Lactuca sativa
Lsat_1_v5_gn_9_124081 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 203922728-203927727 Lactuca sativa
Lsat_1_v5_gn_9_124081 5.0kb downstream 5.0kb downstream 6174   true Lsat_1_v8_lg_9: 203927728-203933901 Lactuca sativa
Lsat_1_v5_gn_9_124081 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 203928902-203933901 Lactuca sativa
Lsat_1_v5_gn_9_124081 10.0kb upstream 10.0kb upstream 11174   true Lsat_1_v8_lg_9: 203917728-203928901 Lactuca sativa
Lsat_1_v5_gn_9_124081 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 203917728-203927727 Lactuca sativa
Lsat_1_v5_gn_9_124081 10.0kb downstream 10.0kb downstream 11174   true Lsat_1_v8_lg_9: 203927728-203938901 Lactuca sativa
Lsat_1_v5_gn_9_124081 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 203928902-203938901 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121480599 5263 Asterids View MSA
123747156 5271 Pentapetalae View MSA
122795420 5272 Eudicot View MSA
122049658 5273 Angiosperm View MSA
123428942 5275 Viridiplantae View MSA
121349742 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain