Gene : Lsat_1_v5_gn_9_13800 L. sativa V8
Defline:  (1 of 2) PTHR23336//PTHR23336:SF23 - ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3. // SUBFAMILY NOT NAMED Genomic Order:  562
Name:  ? Lsat_1_v5_gn_9_13800 Secondary Identifier:  ? PAC:38927440
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_13800 0.5kb upstream 0.5kb upstream 6315   true Lsat_1_v8_lg_9: 18824495-18830809 Lactuca sativa
Lsat_1_v5_gn_9_13800 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 18824495-18824994 Lactuca sativa
Lsat_1_v5_gn_9_13800 0.5kb downstream 0.5kb downstream 6315   true Lsat_1_v8_lg_9: 18824995-18831309 Lactuca sativa
Lsat_1_v5_gn_9_13800 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 18830810-18831309 Lactuca sativa
Lsat_1_v5_gn_9_13800 1.0kb upstream 1.0kb upstream 6815   true Lsat_1_v8_lg_9: 18823995-18830809 Lactuca sativa
Lsat_1_v5_gn_9_13800 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 18823995-18824994 Lactuca sativa
Lsat_1_v5_gn_9_13800 1.0kb downstream 1.0kb downstream 6815   true Lsat_1_v8_lg_9: 18824995-18831809 Lactuca sativa
Lsat_1_v5_gn_9_13800 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 18830810-18831809 Lactuca sativa
Lsat_1_v5_gn_9_13800 2.0kb upstream 2.0kb upstream 7815   true Lsat_1_v8_lg_9: 18822995-18830809 Lactuca sativa
Lsat_1_v5_gn_9_13800 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 18822995-18824994 Lactuca sativa
Lsat_1_v5_gn_9_13800 2.0kb downstream 2.0kb downstream 7815   true Lsat_1_v8_lg_9: 18824995-18832809 Lactuca sativa
Lsat_1_v5_gn_9_13800 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 18830810-18832809 Lactuca sativa
Lsat_1_v5_gn_9_13800 5.0kb upstream 5.0kb upstream 10815   true Lsat_1_v8_lg_9: 18819995-18830809 Lactuca sativa
Lsat_1_v5_gn_9_13800 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 18819995-18824994 Lactuca sativa
Lsat_1_v5_gn_9_13800 5.0kb downstream 5.0kb downstream 10815   true Lsat_1_v8_lg_9: 18824995-18835809 Lactuca sativa
Lsat_1_v5_gn_9_13800 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 18830810-18835809 Lactuca sativa
Lsat_1_v5_gn_9_13800 10.0kb upstream 10.0kb upstream 15815   true Lsat_1_v8_lg_9: 18814995-18830809 Lactuca sativa
Lsat_1_v5_gn_9_13800 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 18814995-18824994 Lactuca sativa
Lsat_1_v5_gn_9_13800 10.0kb downstream 10.0kb downstream 15815   true Lsat_1_v8_lg_9: 18824995-18840809 Lactuca sativa
Lsat_1_v5_gn_9_13800 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 18830810-18840809 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473066 5263 Asterids View MSA
123749673 5271 Pentapetalae View MSA
122797219 5272 Eudicot View MSA
122049123 5273 Angiosperm View MSA
121350931 5274 Embryophyte View MSA
123428387 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain