Gene : Lsat_1_v5_gn_9_15400 L. sativa V8
Defline:  (1 of 1) K12189 - ESCRT-II complex subunit VPS25 (VPS25, EAP20) Genomic Order:  523
Name:  ? Lsat_1_v5_gn_9_15400 Secondary Identifier:  ? PAC:38925336
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_15400 0.5kb upstream 0.5kb upstream 3477   true Lsat_1_v8_lg_9: 17951641-17955117 Lactuca sativa
Lsat_1_v5_gn_9_15400 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 17951641-17952140 Lactuca sativa
Lsat_1_v5_gn_9_15400 0.5kb downstream 0.5kb downstream 3477   true Lsat_1_v8_lg_9: 17952141-17955617 Lactuca sativa
Lsat_1_v5_gn_9_15400 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 17955118-17955617 Lactuca sativa
Lsat_1_v5_gn_9_15400 1.0kb upstream 1.0kb upstream 3977   true Lsat_1_v8_lg_9: 17951141-17955117 Lactuca sativa
Lsat_1_v5_gn_9_15400 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 17951141-17952140 Lactuca sativa
Lsat_1_v5_gn_9_15400 1.0kb downstream 1.0kb downstream 3977   true Lsat_1_v8_lg_9: 17952141-17956117 Lactuca sativa
Lsat_1_v5_gn_9_15400 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 17955118-17956117 Lactuca sativa
Lsat_1_v5_gn_9_15400 2.0kb upstream 2.0kb upstream 4977   true Lsat_1_v8_lg_9: 17950141-17955117 Lactuca sativa
Lsat_1_v5_gn_9_15400 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 17950141-17952140 Lactuca sativa
Lsat_1_v5_gn_9_15400 2.0kb downstream 2.0kb downstream 4977   true Lsat_1_v8_lg_9: 17952141-17957117 Lactuca sativa
Lsat_1_v5_gn_9_15400 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 17955118-17957117 Lactuca sativa
Lsat_1_v5_gn_9_15400 5.0kb upstream 5.0kb upstream 7977   true Lsat_1_v8_lg_9: 17947141-17955117 Lactuca sativa
Lsat_1_v5_gn_9_15400 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 17947141-17952140 Lactuca sativa
Lsat_1_v5_gn_9_15400 5.0kb downstream 5.0kb downstream 7977   true Lsat_1_v8_lg_9: 17952141-17960117 Lactuca sativa
Lsat_1_v5_gn_9_15400 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 17955118-17960117 Lactuca sativa
Lsat_1_v5_gn_9_15400 10.0kb upstream 10.0kb upstream 12977   true Lsat_1_v8_lg_9: 17942141-17955117 Lactuca sativa
Lsat_1_v5_gn_9_15400 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 17942141-17952140 Lactuca sativa
Lsat_1_v5_gn_9_15400 10.0kb downstream 10.0kb downstream 12977   true Lsat_1_v8_lg_9: 17952141-17965117 Lactuca sativa
Lsat_1_v5_gn_9_15400 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 17955118-17965117 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473553 5263 Asterids View MSA
123740104 5271 Pentapetalae View MSA
122789315 5272 Eudicot View MSA
122043076 5273 Angiosperm View MSA
121347128 5274 Embryophyte View MSA
123424055 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain