Gene : Lsat_1_v5_gn_9_17121 L. sativa V8
Defline:  (1 of 3) PTHR22536 - LUNG CANCER METASTASIS-RELATED LCMR1 PROTEIN Genomic Order:  483
Name:  ? Lsat_1_v5_gn_9_17121 Secondary Identifier:  ? PAC:38924135
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_17121 0.5kb upstream 0.5kb upstream 4451   true Lsat_1_v8_lg_9: 16827833-16832283 Lactuca sativa
Lsat_1_v5_gn_9_17121 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 16827833-16828332 Lactuca sativa
Lsat_1_v5_gn_9_17121 0.5kb downstream 0.5kb downstream 4451   true Lsat_1_v8_lg_9: 16828333-16832783 Lactuca sativa
Lsat_1_v5_gn_9_17121 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 16832284-16832783 Lactuca sativa
Lsat_1_v5_gn_9_17121 1.0kb upstream 1.0kb upstream 4951   true Lsat_1_v8_lg_9: 16827333-16832283 Lactuca sativa
Lsat_1_v5_gn_9_17121 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 16827333-16828332 Lactuca sativa
Lsat_1_v5_gn_9_17121 1.0kb downstream 1.0kb downstream 4951   true Lsat_1_v8_lg_9: 16828333-16833283 Lactuca sativa
Lsat_1_v5_gn_9_17121 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 16832284-16833283 Lactuca sativa
Lsat_1_v5_gn_9_17121 2.0kb upstream 2.0kb upstream 5951   true Lsat_1_v8_lg_9: 16826333-16832283 Lactuca sativa
Lsat_1_v5_gn_9_17121 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 16826333-16828332 Lactuca sativa
Lsat_1_v5_gn_9_17121 2.0kb downstream 2.0kb downstream 5951   true Lsat_1_v8_lg_9: 16828333-16834283 Lactuca sativa
Lsat_1_v5_gn_9_17121 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 16832284-16834283 Lactuca sativa
Lsat_1_v5_gn_9_17121 5.0kb upstream 5.0kb upstream 8951   true Lsat_1_v8_lg_9: 16823333-16832283 Lactuca sativa
Lsat_1_v5_gn_9_17121 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 16823333-16828332 Lactuca sativa
Lsat_1_v5_gn_9_17121 5.0kb downstream 5.0kb downstream 8951   true Lsat_1_v8_lg_9: 16828333-16837283 Lactuca sativa
Lsat_1_v5_gn_9_17121 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 16832284-16837283 Lactuca sativa
Lsat_1_v5_gn_9_17121 10.0kb upstream 10.0kb upstream 13951   true Lsat_1_v8_lg_9: 16818333-16832283 Lactuca sativa
Lsat_1_v5_gn_9_17121 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 16818333-16828332 Lactuca sativa
Lsat_1_v5_gn_9_17121 10.0kb downstream 10.0kb downstream 13951   true Lsat_1_v8_lg_9: 16828333-16842283 Lactuca sativa
Lsat_1_v5_gn_9_17121 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 16832284-16842283 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121482053 5263 Asterids View MSA
123743720 5271 Pentapetalae View MSA
122789289 5272 Eudicot View MSA
122041858 5273 Angiosperm View MSA
121345817 5274 Embryophyte View MSA
123425736 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain