Gene : Lsat_1_v5_gn_9_16861 L. sativa V8
Defline:  (1 of 2) K02699 - photosystem I subunit XI (psaL) Genomic Order:  493
Name:  ? Lsat_1_v5_gn_9_16861 Secondary Identifier:  ? PAC:38927502
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PHOTOALL-PWY Lactuca sativa pathologic  
Lsativa PWY-101 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_16861 0.5kb upstream 0.5kb upstream 1973   true Lsat_1_v8_lg_9: 16947990-16949962 Lactuca sativa
Lsat_1_v5_gn_9_16861 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 16947990-16948489 Lactuca sativa
Lsat_1_v5_gn_9_16861 0.5kb downstream 0.5kb downstream 1973   true Lsat_1_v8_lg_9: 16948490-16950462 Lactuca sativa
Lsat_1_v5_gn_9_16861 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 16949963-16950462 Lactuca sativa
Lsat_1_v5_gn_9_16861 1.0kb upstream 1.0kb upstream 2473   true Lsat_1_v8_lg_9: 16947490-16949962 Lactuca sativa
Lsat_1_v5_gn_9_16861 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 16947490-16948489 Lactuca sativa
Lsat_1_v5_gn_9_16861 1.0kb downstream 1.0kb downstream 2473   true Lsat_1_v8_lg_9: 16948490-16950962 Lactuca sativa
Lsat_1_v5_gn_9_16861 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 16949963-16950962 Lactuca sativa
Lsat_1_v5_gn_9_16861 2.0kb upstream 2.0kb upstream 3473   true Lsat_1_v8_lg_9: 16946490-16949962 Lactuca sativa
Lsat_1_v5_gn_9_16861 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 16946490-16948489 Lactuca sativa
Lsat_1_v5_gn_9_16861 2.0kb downstream 2.0kb downstream 3473   true Lsat_1_v8_lg_9: 16948490-16951962 Lactuca sativa
Lsat_1_v5_gn_9_16861 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 16949963-16951962 Lactuca sativa
Lsat_1_v5_gn_9_16861 5.0kb upstream 5.0kb upstream 6473   true Lsat_1_v8_lg_9: 16943490-16949962 Lactuca sativa
Lsat_1_v5_gn_9_16861 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 16943490-16948489 Lactuca sativa
Lsat_1_v5_gn_9_16861 5.0kb downstream 5.0kb downstream 6473   true Lsat_1_v8_lg_9: 16948490-16954962 Lactuca sativa
Lsat_1_v5_gn_9_16861 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 16949963-16954962 Lactuca sativa
Lsat_1_v5_gn_9_16861 10.0kb upstream 10.0kb upstream 11473   true Lsat_1_v8_lg_9: 16938490-16949962 Lactuca sativa
Lsat_1_v5_gn_9_16861 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 16938490-16948489 Lactuca sativa
Lsat_1_v5_gn_9_16861 10.0kb downstream 10.0kb downstream 11473   true Lsat_1_v8_lg_9: 16948490-16959962 Lactuca sativa
Lsat_1_v5_gn_9_16861 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 16949963-16959962 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040995 5273 Angiosperm View MSA
121451547 5263 Asterids View MSA
123750401 5271 Pentapetalae View MSA
122793402 5272 Eudicot View MSA
121343870 5274 Embryophyte View MSA
123424325 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain