Gene : Lsat_1_v5_gn_9_52601 L. sativa V8
Defline:  (1 of 5) PF07279 - Protein of unknown function (DUF1442) (DUF1442) Genomic Order:  1782
Name:  ? Lsat_1_v5_gn_9_52601 Secondary Identifier:  ? PAC:38926024
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_52601 0.5kb upstream 0.5kb upstream 1787   true Lsat_1_v8_lg_9: 59611205-59612991 Lactuca sativa
Lsat_1_v5_gn_9_52601 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 59612492-59612991 Lactuca sativa
Lsat_1_v5_gn_9_52601 0.5kb downstream 0.5kb downstream 1787   true Lsat_1_v8_lg_9: 59610705-59612491 Lactuca sativa
Lsat_1_v5_gn_9_52601 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 59610705-59611204 Lactuca sativa
Lsat_1_v5_gn_9_52601 1.0kb upstream 1.0kb upstream 2287   true Lsat_1_v8_lg_9: 59611205-59613491 Lactuca sativa
Lsat_1_v5_gn_9_52601 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 59612492-59613491 Lactuca sativa
Lsat_1_v5_gn_9_52601 1.0kb downstream 1.0kb downstream 2287   true Lsat_1_v8_lg_9: 59610205-59612491 Lactuca sativa
Lsat_1_v5_gn_9_52601 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 59610205-59611204 Lactuca sativa
Lsat_1_v5_gn_9_52601 2.0kb upstream 2.0kb upstream 3287   true Lsat_1_v8_lg_9: 59611205-59614491 Lactuca sativa
Lsat_1_v5_gn_9_52601 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 59612492-59614491 Lactuca sativa
Lsat_1_v5_gn_9_52601 2.0kb downstream 2.0kb downstream 3287   true Lsat_1_v8_lg_9: 59609205-59612491 Lactuca sativa
Lsat_1_v5_gn_9_52601 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 59609205-59611204 Lactuca sativa
Lsat_1_v5_gn_9_52601 5.0kb upstream 5.0kb upstream 6287   true Lsat_1_v8_lg_9: 59611205-59617491 Lactuca sativa
Lsat_1_v5_gn_9_52601 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 59612492-59617491 Lactuca sativa
Lsat_1_v5_gn_9_52601 5.0kb downstream 5.0kb downstream 6287   true Lsat_1_v8_lg_9: 59606205-59612491 Lactuca sativa
Lsat_1_v5_gn_9_52601 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 59606205-59611204 Lactuca sativa
Lsat_1_v5_gn_9_52601 10.0kb upstream 10.0kb upstream 11287   true Lsat_1_v8_lg_9: 59611205-59622491 Lactuca sativa
Lsat_1_v5_gn_9_52601 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 59612492-59622491 Lactuca sativa
Lsat_1_v5_gn_9_52601 10.0kb downstream 10.0kb downstream 11287   true Lsat_1_v8_lg_9: 59601205-59612491 Lactuca sativa
Lsat_1_v5_gn_9_52601 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 59601205-59611204 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121472064 5263 Asterids View MSA
123746429 5271 Pentapetalae View MSA
122795029 5272 Eudicot View MSA
122048699 5273 Angiosperm View MSA
121348528 5274 Embryophyte View MSA
123380900 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain