Gene : Lsat_1_v5_gn_9_56840 L. sativa V8
Defline:  (1 of 8) PF04278 - Tic22-like family (Tic22) Genomic Order:  1934
Name:  ? Lsat_1_v5_gn_9_56840 Secondary Identifier:  ? PAC:38924458
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_56840 0.5kb upstream 0.5kb upstream 4462   true Lsat_1_v8_lg_9: 67840193-67844654 Lactuca sativa
Lsat_1_v5_gn_9_56840 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 67844155-67844654 Lactuca sativa
Lsat_1_v5_gn_9_56840 0.5kb downstream 0.5kb downstream 4462   true Lsat_1_v8_lg_9: 67839693-67844154 Lactuca sativa
Lsat_1_v5_gn_9_56840 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 67839693-67840192 Lactuca sativa
Lsat_1_v5_gn_9_56840 1.0kb upstream 1.0kb upstream 4962   true Lsat_1_v8_lg_9: 67840193-67845154 Lactuca sativa
Lsat_1_v5_gn_9_56840 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 67844155-67845154 Lactuca sativa
Lsat_1_v5_gn_9_56840 1.0kb downstream 1.0kb downstream 4962   true Lsat_1_v8_lg_9: 67839193-67844154 Lactuca sativa
Lsat_1_v5_gn_9_56840 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 67839193-67840192 Lactuca sativa
Lsat_1_v5_gn_9_56840 2.0kb upstream 2.0kb upstream 5962   true Lsat_1_v8_lg_9: 67840193-67846154 Lactuca sativa
Lsat_1_v5_gn_9_56840 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 67844155-67846154 Lactuca sativa
Lsat_1_v5_gn_9_56840 2.0kb downstream 2.0kb downstream 5962   true Lsat_1_v8_lg_9: 67838193-67844154 Lactuca sativa
Lsat_1_v5_gn_9_56840 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 67838193-67840192 Lactuca sativa
Lsat_1_v5_gn_9_56840 5.0kb upstream 5.0kb upstream 8962   true Lsat_1_v8_lg_9: 67840193-67849154 Lactuca sativa
Lsat_1_v5_gn_9_56840 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 67844155-67849154 Lactuca sativa
Lsat_1_v5_gn_9_56840 5.0kb downstream 5.0kb downstream 8962   true Lsat_1_v8_lg_9: 67835193-67844154 Lactuca sativa
Lsat_1_v5_gn_9_56840 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 67835193-67840192 Lactuca sativa
Lsat_1_v5_gn_9_56840 10.0kb upstream 10.0kb upstream 13962   true Lsat_1_v8_lg_9: 67840193-67854154 Lactuca sativa
Lsat_1_v5_gn_9_56840 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 67844155-67854154 Lactuca sativa
Lsat_1_v5_gn_9_56840 10.0kb downstream 10.0kb downstream 13962   true Lsat_1_v8_lg_9: 67830193-67844154 Lactuca sativa
Lsat_1_v5_gn_9_56840 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 67830193-67840192 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121472742 5263 Asterids View MSA
123744483 5271 Pentapetalae View MSA
122790475 5272 Eudicot View MSA
122047380 5273 Angiosperm View MSA
121344233 5274 Embryophyte View MSA
123380010 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain