Gene : Lsat_1_v5_gn_9_57340 L. sativa V8
Defline:  (1 of 1) PF11341 - Protein of unknown function (DUF3143) (DUF3143) Genomic Order:  1917
Name:  ? Lsat_1_v5_gn_9_57340 Secondary Identifier:  ? PAC:38925894
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_57340 0.5kb upstream 0.5kb upstream 1579   true Lsat_1_v8_lg_9: 67432454-67434032 Lactuca sativa
Lsat_1_v5_gn_9_57340 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 67433533-67434032 Lactuca sativa
Lsat_1_v5_gn_9_57340 0.5kb downstream 0.5kb downstream 1579   true Lsat_1_v8_lg_9: 67431954-67433532 Lactuca sativa
Lsat_1_v5_gn_9_57340 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 67431954-67432453 Lactuca sativa
Lsat_1_v5_gn_9_57340 1.0kb upstream 1.0kb upstream 2079   true Lsat_1_v8_lg_9: 67432454-67434532 Lactuca sativa
Lsat_1_v5_gn_9_57340 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 67433533-67434532 Lactuca sativa
Lsat_1_v5_gn_9_57340 1.0kb downstream 1.0kb downstream 2079   true Lsat_1_v8_lg_9: 67431454-67433532 Lactuca sativa
Lsat_1_v5_gn_9_57340 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 67431454-67432453 Lactuca sativa
Lsat_1_v5_gn_9_57340 2.0kb upstream 2.0kb upstream 3079   true Lsat_1_v8_lg_9: 67432454-67435532 Lactuca sativa
Lsat_1_v5_gn_9_57340 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 67433533-67435532 Lactuca sativa
Lsat_1_v5_gn_9_57340 2.0kb downstream 2.0kb downstream 3079   true Lsat_1_v8_lg_9: 67430454-67433532 Lactuca sativa
Lsat_1_v5_gn_9_57340 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 67430454-67432453 Lactuca sativa
Lsat_1_v5_gn_9_57340 5.0kb upstream 5.0kb upstream 6079   true Lsat_1_v8_lg_9: 67432454-67438532 Lactuca sativa
Lsat_1_v5_gn_9_57340 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 67433533-67438532 Lactuca sativa
Lsat_1_v5_gn_9_57340 5.0kb downstream 5.0kb downstream 6079   true Lsat_1_v8_lg_9: 67427454-67433532 Lactuca sativa
Lsat_1_v5_gn_9_57340 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 67427454-67432453 Lactuca sativa
Lsat_1_v5_gn_9_57340 10.0kb upstream 10.0kb upstream 11079   true Lsat_1_v8_lg_9: 67432454-67443532 Lactuca sativa
Lsat_1_v5_gn_9_57340 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 67433533-67443532 Lactuca sativa
Lsat_1_v5_gn_9_57340 10.0kb downstream 10.0kb downstream 11079   true Lsat_1_v8_lg_9: 67422454-67433532 Lactuca sativa
Lsat_1_v5_gn_9_57340 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 67422454-67432453 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467772 5263 Asterids View MSA
123737181 5271 Pentapetalae View MSA
122792714 5272 Eudicot View MSA
122044446 5273 Angiosperm View MSA
121347894 5274 Embryophyte View MSA
123380669 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain