Gene : Lsat_1_v5_gn_9_58480 L. sativa V8
Defline:  (1 of 3) PTHR31773//PTHR31773:SF11 - FAMILY NOT NAMED // METACASPASE-2 Genomic Order:  1964
Name:  ? Lsat_1_v5_gn_9_58480 Secondary Identifier:  ? PAC:38923073
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_58480 0.5kb upstream 0.5kb upstream 3488   true Lsat_1_v8_lg_9: 69389060-69392547 Lactuca sativa
Lsat_1_v5_gn_9_58480 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 69392048-69392547 Lactuca sativa
Lsat_1_v5_gn_9_58480 0.5kb downstream 0.5kb downstream 3488   true Lsat_1_v8_lg_9: 69388560-69392047 Lactuca sativa
Lsat_1_v5_gn_9_58480 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 69388560-69389059 Lactuca sativa
Lsat_1_v5_gn_9_58480 1.0kb upstream 1.0kb upstream 3988   true Lsat_1_v8_lg_9: 69389060-69393047 Lactuca sativa
Lsat_1_v5_gn_9_58480 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 69392048-69393047 Lactuca sativa
Lsat_1_v5_gn_9_58480 1.0kb downstream 1.0kb downstream 3988   true Lsat_1_v8_lg_9: 69388060-69392047 Lactuca sativa
Lsat_1_v5_gn_9_58480 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 69388060-69389059 Lactuca sativa
Lsat_1_v5_gn_9_58480 2.0kb upstream 2.0kb upstream 4988   true Lsat_1_v8_lg_9: 69389060-69394047 Lactuca sativa
Lsat_1_v5_gn_9_58480 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 69392048-69394047 Lactuca sativa
Lsat_1_v5_gn_9_58480 2.0kb downstream 2.0kb downstream 4988   true Lsat_1_v8_lg_9: 69387060-69392047 Lactuca sativa
Lsat_1_v5_gn_9_58480 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 69387060-69389059 Lactuca sativa
Lsat_1_v5_gn_9_58480 5.0kb upstream 5.0kb upstream 7988   true Lsat_1_v8_lg_9: 69389060-69397047 Lactuca sativa
Lsat_1_v5_gn_9_58480 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 69392048-69397047 Lactuca sativa
Lsat_1_v5_gn_9_58480 5.0kb downstream 5.0kb downstream 7988   true Lsat_1_v8_lg_9: 69384060-69392047 Lactuca sativa
Lsat_1_v5_gn_9_58480 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 69384060-69389059 Lactuca sativa
Lsat_1_v5_gn_9_58480 10.0kb upstream 10.0kb upstream 12988   true Lsat_1_v8_lg_9: 69389060-69402047 Lactuca sativa
Lsat_1_v5_gn_9_58480 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 69392048-69402047 Lactuca sativa
Lsat_1_v5_gn_9_58480 10.0kb downstream 10.0kb downstream 12988   true Lsat_1_v8_lg_9: 69379060-69392047 Lactuca sativa
Lsat_1_v5_gn_9_58480 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 69379060-69389059 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121464592 5263 Asterids View MSA
123741855 5271 Pentapetalae View MSA
122790648 5272 Eudicot View MSA
122050099 5273 Angiosperm View MSA
123428899 5275 Viridiplantae View MSA
121348125 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain