Gene : Lsat_1_v5_gn_9_6120 L. sativa V8
Defline:  (1 of 5) PTHR13989 - REPLICATION PROTEIN A-RELATED Genomic Order:  238
Name:  ? Lsat_1_v5_gn_9_6120 Secondary Identifier:  ? PAC:38923633
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_6120 0.5kb upstream 0.5kb upstream 1500   true Lsat_1_v8_lg_9: 9286180-9287679 Lactuca sativa
Lsat_1_v5_gn_9_6120 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 9287180-9287679 Lactuca sativa
Lsat_1_v5_gn_9_6120 0.5kb downstream 0.5kb downstream 1500   true Lsat_1_v8_lg_9: 9285680-9287179 Lactuca sativa
Lsat_1_v5_gn_9_6120 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 9285680-9286179 Lactuca sativa
Lsat_1_v5_gn_9_6120 1.0kb upstream 1.0kb upstream 2000   true Lsat_1_v8_lg_9: 9286180-9288179 Lactuca sativa
Lsat_1_v5_gn_9_6120 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 9287180-9288179 Lactuca sativa
Lsat_1_v5_gn_9_6120 1.0kb downstream 1.0kb downstream 2000   true Lsat_1_v8_lg_9: 9285180-9287179 Lactuca sativa
Lsat_1_v5_gn_9_6120 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 9285180-9286179 Lactuca sativa
Lsat_1_v5_gn_9_6120 2.0kb upstream 2.0kb upstream 3000   true Lsat_1_v8_lg_9: 9286180-9289179 Lactuca sativa
Lsat_1_v5_gn_9_6120 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 9287180-9289179 Lactuca sativa
Lsat_1_v5_gn_9_6120 2.0kb downstream 2.0kb downstream 3000   true Lsat_1_v8_lg_9: 9284180-9287179 Lactuca sativa
Lsat_1_v5_gn_9_6120 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 9284180-9286179 Lactuca sativa
Lsat_1_v5_gn_9_6120 5.0kb upstream 5.0kb upstream 6000   true Lsat_1_v8_lg_9: 9286180-9292179 Lactuca sativa
Lsat_1_v5_gn_9_6120 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 9287180-9292179 Lactuca sativa
Lsat_1_v5_gn_9_6120 5.0kb downstream 5.0kb downstream 6000   true Lsat_1_v8_lg_9: 9281180-9287179 Lactuca sativa
Lsat_1_v5_gn_9_6120 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 9281180-9286179 Lactuca sativa
Lsat_1_v5_gn_9_6120 10.0kb upstream 10.0kb upstream 11000   true Lsat_1_v8_lg_9: 9286180-9297179 Lactuca sativa
Lsat_1_v5_gn_9_6120 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 9287180-9297179 Lactuca sativa
Lsat_1_v5_gn_9_6120 10.0kb downstream 10.0kb downstream 11000   true Lsat_1_v8_lg_9: 9276180-9287179 Lactuca sativa
Lsat_1_v5_gn_9_6120 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 9276180-9286179 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466366 5263 Asterids View MSA
123737175 5271 Pentapetalae View MSA
122786413 5272 Eudicot View MSA
122044102 5273 Angiosperm View MSA
121345132 5274 Embryophyte View MSA
123425190 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain