Gene : Lsat_1_v5_gn_9_65321 L. sativa V8
Defline:  (1 of 1) PTHR11946//PTHR11946:SF89 - ISOLEUCYL, LEUCYL, TYROSYL, VALYL AND METHIONYL-TRNA SYNTHETASES // METHIONYL-TRNA SYNTHETASE Genomic Order:  2171
Name:  ? Lsat_1_v5_gn_9_65321 Secondary Identifier:  ? PAC:38922506
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa TRNA-CHARGING-PWY Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_65321 0.5kb upstream 0.5kb upstream 6357   true Lsat_1_v8_lg_9: 83226828-83233184 Lactuca sativa
Lsat_1_v5_gn_9_65321 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 83226828-83227327 Lactuca sativa
Lsat_1_v5_gn_9_65321 0.5kb downstream 0.5kb downstream 6357   true Lsat_1_v8_lg_9: 83227328-83233684 Lactuca sativa
Lsat_1_v5_gn_9_65321 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 83233185-83233684 Lactuca sativa
Lsat_1_v5_gn_9_65321 1.0kb upstream 1.0kb upstream 6857   true Lsat_1_v8_lg_9: 83226328-83233184 Lactuca sativa
Lsat_1_v5_gn_9_65321 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 83226328-83227327 Lactuca sativa
Lsat_1_v5_gn_9_65321 1.0kb downstream 1.0kb downstream 6857   true Lsat_1_v8_lg_9: 83227328-83234184 Lactuca sativa
Lsat_1_v5_gn_9_65321 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 83233185-83234184 Lactuca sativa
Lsat_1_v5_gn_9_65321 2.0kb upstream 2.0kb upstream 7857   true Lsat_1_v8_lg_9: 83225328-83233184 Lactuca sativa
Lsat_1_v5_gn_9_65321 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 83225328-83227327 Lactuca sativa
Lsat_1_v5_gn_9_65321 2.0kb downstream 2.0kb downstream 7857   true Lsat_1_v8_lg_9: 83227328-83235184 Lactuca sativa
Lsat_1_v5_gn_9_65321 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 83233185-83235184 Lactuca sativa
Lsat_1_v5_gn_9_65321 5.0kb upstream 5.0kb upstream 10857   true Lsat_1_v8_lg_9: 83222328-83233184 Lactuca sativa
Lsat_1_v5_gn_9_65321 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 83222328-83227327 Lactuca sativa
Lsat_1_v5_gn_9_65321 5.0kb downstream 5.0kb downstream 10857   true Lsat_1_v8_lg_9: 83227328-83238184 Lactuca sativa
Lsat_1_v5_gn_9_65321 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 83233185-83238184 Lactuca sativa
Lsat_1_v5_gn_9_65321 10.0kb upstream 10.0kb upstream 15857   true Lsat_1_v8_lg_9: 83217328-83233184 Lactuca sativa
Lsat_1_v5_gn_9_65321 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 83217328-83227327 Lactuca sativa
Lsat_1_v5_gn_9_65321 10.0kb downstream 10.0kb downstream 15857   true Lsat_1_v8_lg_9: 83227328-83243184 Lactuca sativa
Lsat_1_v5_gn_9_65321 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 83233185-83243184 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121475121 5263 Asterids View MSA
123752968 5271 Pentapetalae View MSA
122787831 5272 Eudicot View MSA
122046373 5273 Angiosperm View MSA
121347151 5274 Embryophyte View MSA
123428788 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain