Gene : Lsat_1_v5_gn_9_6500 L. sativa V8
Defline:  (1 of 1) PTHR10969:SF25 - AUTOPHAGY-RELATED PROTEIN 8I Genomic Order:  219
Name:  ? Lsat_1_v5_gn_9_6500 Secondary Identifier:  ? PAC:38923716
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_6500 0.5kb upstream 0.5kb upstream 1715   true Lsat_1_v8_lg_9: 8315717-8317431 Lactuca sativa
Lsat_1_v5_gn_9_6500 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 8315717-8316216 Lactuca sativa
Lsat_1_v5_gn_9_6500 0.5kb downstream 0.5kb downstream 1715   true Lsat_1_v8_lg_9: 8316217-8317931 Lactuca sativa
Lsat_1_v5_gn_9_6500 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 8317432-8317931 Lactuca sativa
Lsat_1_v5_gn_9_6500 1.0kb upstream 1.0kb upstream 2215   true Lsat_1_v8_lg_9: 8315217-8317431 Lactuca sativa
Lsat_1_v5_gn_9_6500 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 8315217-8316216 Lactuca sativa
Lsat_1_v5_gn_9_6500 1.0kb downstream 1.0kb downstream 2215   true Lsat_1_v8_lg_9: 8316217-8318431 Lactuca sativa
Lsat_1_v5_gn_9_6500 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 8317432-8318431 Lactuca sativa
Lsat_1_v5_gn_9_6500 2.0kb upstream 2.0kb upstream 3215   true Lsat_1_v8_lg_9: 8314217-8317431 Lactuca sativa
Lsat_1_v5_gn_9_6500 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 8314217-8316216 Lactuca sativa
Lsat_1_v5_gn_9_6500 2.0kb downstream 2.0kb downstream 3215   true Lsat_1_v8_lg_9: 8316217-8319431 Lactuca sativa
Lsat_1_v5_gn_9_6500 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 8317432-8319431 Lactuca sativa
Lsat_1_v5_gn_9_6500 5.0kb upstream 5.0kb upstream 6215   true Lsat_1_v8_lg_9: 8311217-8317431 Lactuca sativa
Lsat_1_v5_gn_9_6500 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 8311217-8316216 Lactuca sativa
Lsat_1_v5_gn_9_6500 5.0kb downstream 5.0kb downstream 6215   true Lsat_1_v8_lg_9: 8316217-8322431 Lactuca sativa
Lsat_1_v5_gn_9_6500 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 8317432-8322431 Lactuca sativa
Lsat_1_v5_gn_9_6500 10.0kb upstream 10.0kb upstream 11215   true Lsat_1_v8_lg_9: 8306217-8317431 Lactuca sativa
Lsat_1_v5_gn_9_6500 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 8306217-8316216 Lactuca sativa
Lsat_1_v5_gn_9_6500 10.0kb downstream 10.0kb downstream 11215   true Lsat_1_v8_lg_9: 8316217-8327431 Lactuca sativa
Lsat_1_v5_gn_9_6500 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 8317432-8327431 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466842 5263 Asterids View MSA
123743187 5271 Pentapetalae View MSA
122792251 5272 Eudicot View MSA
122048918 5273 Angiosperm View MSA
121349541 5274 Embryophyte View MSA
123427174 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain