Gene : Lsat_1_v5_gn_9_66300 L. sativa V8
Defline:  (1 of 1) KOG0131//KOG4400 - Splicing factor 3b, subunit 4 // E3 ubiquitin ligase interacting with arginine methyltransferase Genomic Order:  2177
Name:  ? Lsat_1_v5_gn_9_66300 Secondary Identifier:  ? PAC:38925262
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_66300 0.5kb upstream 0.5kb upstream 3362   true Lsat_1_v8_lg_9: 83947547-83950908 Lactuca sativa
Lsat_1_v5_gn_9_66300 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 83950409-83950908 Lactuca sativa
Lsat_1_v5_gn_9_66300 0.5kb downstream 0.5kb downstream 3362   true Lsat_1_v8_lg_9: 83947047-83950408 Lactuca sativa
Lsat_1_v5_gn_9_66300 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 83947047-83947546 Lactuca sativa
Lsat_1_v5_gn_9_66300 1.0kb upstream 1.0kb upstream 3862   true Lsat_1_v8_lg_9: 83947547-83951408 Lactuca sativa
Lsat_1_v5_gn_9_66300 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 83950409-83951408 Lactuca sativa
Lsat_1_v5_gn_9_66300 1.0kb downstream 1.0kb downstream 3862   true Lsat_1_v8_lg_9: 83946547-83950408 Lactuca sativa
Lsat_1_v5_gn_9_66300 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 83946547-83947546 Lactuca sativa
Lsat_1_v5_gn_9_66300 2.0kb upstream 2.0kb upstream 4862   true Lsat_1_v8_lg_9: 83947547-83952408 Lactuca sativa
Lsat_1_v5_gn_9_66300 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 83950409-83952408 Lactuca sativa
Lsat_1_v5_gn_9_66300 2.0kb downstream 2.0kb downstream 4862   true Lsat_1_v8_lg_9: 83945547-83950408 Lactuca sativa
Lsat_1_v5_gn_9_66300 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 83945547-83947546 Lactuca sativa
Lsat_1_v5_gn_9_66300 5.0kb upstream 5.0kb upstream 7862   true Lsat_1_v8_lg_9: 83947547-83955408 Lactuca sativa
Lsat_1_v5_gn_9_66300 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 83950409-83955408 Lactuca sativa
Lsat_1_v5_gn_9_66300 5.0kb downstream 5.0kb downstream 7862   true Lsat_1_v8_lg_9: 83942547-83950408 Lactuca sativa
Lsat_1_v5_gn_9_66300 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 83942547-83947546 Lactuca sativa
Lsat_1_v5_gn_9_66300 10.0kb upstream 10.0kb upstream 12862   true Lsat_1_v8_lg_9: 83947547-83960408 Lactuca sativa
Lsat_1_v5_gn_9_66300 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 83950409-83960408 Lactuca sativa
Lsat_1_v5_gn_9_66300 10.0kb downstream 10.0kb downstream 12862   true Lsat_1_v8_lg_9: 83937547-83950408 Lactuca sativa
Lsat_1_v5_gn_9_66300 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 83937547-83947546 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471253 5263 Asterids View MSA
123748314 5271 Pentapetalae View MSA
122791065 5272 Eudicot View MSA
122048889 5273 Angiosperm View MSA
123429142 5275 Viridiplantae View MSA
121348554 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain