Gene : Lsat_1_v5_gn_9_67461 L. sativa V8
Defline:  (1 of 50) PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Genomic Order:  2220
Name:  ? Lsat_1_v5_gn_9_67461 Secondary Identifier:  ? PAC:38923928
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_67461 0.5kb upstream 0.5kb upstream 3390   true Lsat_1_v8_lg_9: 86456549-86459938 Lactuca sativa
Lsat_1_v5_gn_9_67461 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 86456549-86457048 Lactuca sativa
Lsat_1_v5_gn_9_67461 0.5kb downstream 0.5kb downstream 3390   true Lsat_1_v8_lg_9: 86457049-86460438 Lactuca sativa
Lsat_1_v5_gn_9_67461 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 86459939-86460438 Lactuca sativa
Lsat_1_v5_gn_9_67461 1.0kb upstream 1.0kb upstream 3890   true Lsat_1_v8_lg_9: 86456049-86459938 Lactuca sativa
Lsat_1_v5_gn_9_67461 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 86456049-86457048 Lactuca sativa
Lsat_1_v5_gn_9_67461 1.0kb downstream 1.0kb downstream 3890   true Lsat_1_v8_lg_9: 86457049-86460938 Lactuca sativa
Lsat_1_v5_gn_9_67461 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 86459939-86460938 Lactuca sativa
Lsat_1_v5_gn_9_67461 2.0kb upstream 2.0kb upstream 4890   true Lsat_1_v8_lg_9: 86455049-86459938 Lactuca sativa
Lsat_1_v5_gn_9_67461 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 86455049-86457048 Lactuca sativa
Lsat_1_v5_gn_9_67461 2.0kb downstream 2.0kb downstream 4890   true Lsat_1_v8_lg_9: 86457049-86461938 Lactuca sativa
Lsat_1_v5_gn_9_67461 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 86459939-86461938 Lactuca sativa
Lsat_1_v5_gn_9_67461 5.0kb upstream 5.0kb upstream 7890   true Lsat_1_v8_lg_9: 86452049-86459938 Lactuca sativa
Lsat_1_v5_gn_9_67461 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 86452049-86457048 Lactuca sativa
Lsat_1_v5_gn_9_67461 5.0kb downstream 5.0kb downstream 7890   true Lsat_1_v8_lg_9: 86457049-86464938 Lactuca sativa
Lsat_1_v5_gn_9_67461 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 86459939-86464938 Lactuca sativa
Lsat_1_v5_gn_9_67461 10.0kb upstream 10.0kb upstream 12890   true Lsat_1_v8_lg_9: 86447049-86459938 Lactuca sativa
Lsat_1_v5_gn_9_67461 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 86447049-86457048 Lactuca sativa
Lsat_1_v5_gn_9_67461 10.0kb downstream 10.0kb downstream 12890   true Lsat_1_v8_lg_9: 86457049-86469938 Lactuca sativa
Lsat_1_v5_gn_9_67461 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 86459939-86469938 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469885 5263 Asterids View MSA
123738261 5271 Pentapetalae View MSA
122794449 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain