Gene : Lsat_1_v5_gn_9_67821 L. sativa V8
Defline:  (1 of 12) K00588 - caffeoyl-CoA O-methyltransferase (E2.1.1.104) Genomic Order:  2213
Name:  ? Lsat_1_v5_gn_9_67821 Secondary Identifier:  ? PAC:38923943
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-1121 Lactuca sativa pathologic  
Lsativa PWY-361 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_67821 0.5kb upstream 0.5kb upstream 1696   true Lsat_1_v8_lg_9: 86126461-86128156 Lactuca sativa
Lsat_1_v5_gn_9_67821 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 86126461-86126960 Lactuca sativa
Lsat_1_v5_gn_9_67821 0.5kb downstream 0.5kb downstream 1696   true Lsat_1_v8_lg_9: 86126961-86128656 Lactuca sativa
Lsat_1_v5_gn_9_67821 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 86128157-86128656 Lactuca sativa
Lsat_1_v5_gn_9_67821 1.0kb upstream 1.0kb upstream 2196   true Lsat_1_v8_lg_9: 86125961-86128156 Lactuca sativa
Lsat_1_v5_gn_9_67821 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 86125961-86126960 Lactuca sativa
Lsat_1_v5_gn_9_67821 1.0kb downstream 1.0kb downstream 2196   true Lsat_1_v8_lg_9: 86126961-86129156 Lactuca sativa
Lsat_1_v5_gn_9_67821 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 86128157-86129156 Lactuca sativa
Lsat_1_v5_gn_9_67821 2.0kb upstream 2.0kb upstream 3196   true Lsat_1_v8_lg_9: 86124961-86128156 Lactuca sativa
Lsat_1_v5_gn_9_67821 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 86124961-86126960 Lactuca sativa
Lsat_1_v5_gn_9_67821 2.0kb downstream 2.0kb downstream 3196   true Lsat_1_v8_lg_9: 86126961-86130156 Lactuca sativa
Lsat_1_v5_gn_9_67821 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 86128157-86130156 Lactuca sativa
Lsat_1_v5_gn_9_67821 5.0kb upstream 5.0kb upstream 6196   true Lsat_1_v8_lg_9: 86121961-86128156 Lactuca sativa
Lsat_1_v5_gn_9_67821 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 86121961-86126960 Lactuca sativa
Lsat_1_v5_gn_9_67821 5.0kb downstream 5.0kb downstream 6196   true Lsat_1_v8_lg_9: 86126961-86133156 Lactuca sativa
Lsat_1_v5_gn_9_67821 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 86128157-86133156 Lactuca sativa
Lsat_1_v5_gn_9_67821 10.0kb upstream 10.0kb upstream 11196   true Lsat_1_v8_lg_9: 86116961-86128156 Lactuca sativa
Lsat_1_v5_gn_9_67821 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 86116961-86126960 Lactuca sativa
Lsat_1_v5_gn_9_67821 10.0kb downstream 10.0kb downstream 11196   true Lsat_1_v8_lg_9: 86126961-86138156 Lactuca sativa
Lsat_1_v5_gn_9_67821 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 86128157-86138156 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121477636 5263 Asterids View MSA
123746911 5271 Pentapetalae View MSA
122790683 5272 Eudicot View MSA
122043643 5273 Angiosperm View MSA
121346702 5274 Embryophyte View MSA
123427843 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain