Gene : Lsat_1_v5_gn_9_69720 L. sativa V8
Defline:  (1 of 5) PTHR10257:SF20 - SERINE/THREONINE PROTEIN PHOSPHATASE 2A 57 KDA REGULATORY SUBUNIT B' ALPHA ISOFORM-RELATED Genomic Order:  2271
Name:  ? Lsat_1_v5_gn_9_69720 Secondary Identifier:  ? PAC:38925217
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_69720 0.5kb upstream 0.5kb upstream 3915   true Lsat_1_v8_lg_9: 90060406-90064320 Lactuca sativa
Lsat_1_v5_gn_9_69720 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 90063821-90064320 Lactuca sativa
Lsat_1_v5_gn_9_69720 0.5kb downstream 0.5kb downstream 3915   true Lsat_1_v8_lg_9: 90059906-90063820 Lactuca sativa
Lsat_1_v5_gn_9_69720 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 90059906-90060405 Lactuca sativa
Lsat_1_v5_gn_9_69720 1.0kb upstream 1.0kb upstream 4415   true Lsat_1_v8_lg_9: 90060406-90064820 Lactuca sativa
Lsat_1_v5_gn_9_69720 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 90063821-90064820 Lactuca sativa
Lsat_1_v5_gn_9_69720 1.0kb downstream 1.0kb downstream 4415   true Lsat_1_v8_lg_9: 90059406-90063820 Lactuca sativa
Lsat_1_v5_gn_9_69720 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 90059406-90060405 Lactuca sativa
Lsat_1_v5_gn_9_69720 2.0kb upstream 2.0kb upstream 5415   true Lsat_1_v8_lg_9: 90060406-90065820 Lactuca sativa
Lsat_1_v5_gn_9_69720 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 90063821-90065820 Lactuca sativa
Lsat_1_v5_gn_9_69720 2.0kb downstream 2.0kb downstream 5415   true Lsat_1_v8_lg_9: 90058406-90063820 Lactuca sativa
Lsat_1_v5_gn_9_69720 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 90058406-90060405 Lactuca sativa
Lsat_1_v5_gn_9_69720 5.0kb upstream 5.0kb upstream 8415   true Lsat_1_v8_lg_9: 90060406-90068820 Lactuca sativa
Lsat_1_v5_gn_9_69720 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 90063821-90068820 Lactuca sativa
Lsat_1_v5_gn_9_69720 5.0kb downstream 5.0kb downstream 8415   true Lsat_1_v8_lg_9: 90055406-90063820 Lactuca sativa
Lsat_1_v5_gn_9_69720 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 90055406-90060405 Lactuca sativa
Lsat_1_v5_gn_9_69720 10.0kb upstream 10.0kb upstream 13415   true Lsat_1_v8_lg_9: 90060406-90073820 Lactuca sativa
Lsat_1_v5_gn_9_69720 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 90063821-90073820 Lactuca sativa
Lsat_1_v5_gn_9_69720 10.0kb downstream 10.0kb downstream 13415   true Lsat_1_v8_lg_9: 90050406-90063820 Lactuca sativa
Lsat_1_v5_gn_9_69720 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 90050406-90060405 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470718 5263 Asterids View MSA
123742525 5271 Pentapetalae View MSA
122795067 5272 Eudicot View MSA
122048679 5273 Angiosperm View MSA
121346157 5274 Embryophyte View MSA
123427992 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain