Gene : Lsat_1_v5_gn_9_35780 L. sativa V8
Defline:  (1 of 1) K01962 - acetyl-CoA carboxylase carboxyl transferase subunit alpha (accA) Genomic Order:  1168
Name:  ? Lsat_1_v5_gn_9_35780 Secondary Identifier:  ? PAC:38926089
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY0-1264 Lactuca sativa pathologic  
Lsativa PWY-4381 Lactuca sativa pathologic  
Lsativa PWY-5156 Lactuca sativa pathologic  
Lsativa PWY-7388 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_35780 0.5kb upstream 0.5kb upstream 5516   true Lsat_1_v8_lg_9: 39416338-39421853 Lactuca sativa
Lsat_1_v5_gn_9_35780 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 39421354-39421853 Lactuca sativa
Lsat_1_v5_gn_9_35780 0.5kb downstream 0.5kb downstream 5516   true Lsat_1_v8_lg_9: 39415838-39421353 Lactuca sativa
Lsat_1_v5_gn_9_35780 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 39415838-39416337 Lactuca sativa
Lsat_1_v5_gn_9_35780 1.0kb upstream 1.0kb upstream 6016   true Lsat_1_v8_lg_9: 39416338-39422353 Lactuca sativa
Lsat_1_v5_gn_9_35780 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 39421354-39422353 Lactuca sativa
Lsat_1_v5_gn_9_35780 1.0kb downstream 1.0kb downstream 6016   true Lsat_1_v8_lg_9: 39415338-39421353 Lactuca sativa
Lsat_1_v5_gn_9_35780 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 39415338-39416337 Lactuca sativa
Lsat_1_v5_gn_9_35780 2.0kb upstream 2.0kb upstream 7016   true Lsat_1_v8_lg_9: 39416338-39423353 Lactuca sativa
Lsat_1_v5_gn_9_35780 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 39421354-39423353 Lactuca sativa
Lsat_1_v5_gn_9_35780 2.0kb downstream 2.0kb downstream 7016   true Lsat_1_v8_lg_9: 39414338-39421353 Lactuca sativa
Lsat_1_v5_gn_9_35780 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 39414338-39416337 Lactuca sativa
Lsat_1_v5_gn_9_35780 5.0kb upstream 5.0kb upstream 10016   true Lsat_1_v8_lg_9: 39416338-39426353 Lactuca sativa
Lsat_1_v5_gn_9_35780 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 39421354-39426353 Lactuca sativa
Lsat_1_v5_gn_9_35780 5.0kb downstream 5.0kb downstream 10016   true Lsat_1_v8_lg_9: 39411338-39421353 Lactuca sativa
Lsat_1_v5_gn_9_35780 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 39411338-39416337 Lactuca sativa
Lsat_1_v5_gn_9_35780 10.0kb upstream 10.0kb upstream 15016   true Lsat_1_v8_lg_9: 39416338-39431353 Lactuca sativa
Lsat_1_v5_gn_9_35780 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 39421354-39431353 Lactuca sativa
Lsat_1_v5_gn_9_35780 10.0kb downstream 10.0kb downstream 15016   true Lsat_1_v8_lg_9: 39406338-39421353 Lactuca sativa
Lsat_1_v5_gn_9_35780 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 39406338-39416337 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467484 5263 Asterids View MSA
123737036 5271 Pentapetalae View MSA
122792152 5272 Eudicot View MSA
122047100 5273 Angiosperm View MSA
121351185 5274 Embryophyte View MSA
123426636 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain