Gene : Lsat_1_v5_gn_9_38080 L. sativa V8
Defline:  (1 of 1) PTHR32444//PTHR32444:SF6 - FAMILY NOT NAMED // D-MANNOSE BINDING LECTIN PROTEIN WITH APPLE-LIKE CARBOHYDRATE-BINDING DOMAIN Genomic Order:  1243
Name:  ? Lsat_1_v5_gn_9_38080 Secondary Identifier:  ? PAC:38922912
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_38080 0.5kb upstream 0.5kb upstream 2610   true Lsat_1_v8_lg_9: 41857946-41860555 Lactuca sativa
Lsat_1_v5_gn_9_38080 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 41860056-41860555 Lactuca sativa
Lsat_1_v5_gn_9_38080 0.5kb downstream 0.5kb downstream 2610   true Lsat_1_v8_lg_9: 41857446-41860055 Lactuca sativa
Lsat_1_v5_gn_9_38080 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 41857446-41857945 Lactuca sativa
Lsat_1_v5_gn_9_38080 1.0kb upstream 1.0kb upstream 3110   true Lsat_1_v8_lg_9: 41857946-41861055 Lactuca sativa
Lsat_1_v5_gn_9_38080 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 41860056-41861055 Lactuca sativa
Lsat_1_v5_gn_9_38080 1.0kb downstream 1.0kb downstream 3110   true Lsat_1_v8_lg_9: 41856946-41860055 Lactuca sativa
Lsat_1_v5_gn_9_38080 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 41856946-41857945 Lactuca sativa
Lsat_1_v5_gn_9_38080 2.0kb upstream 2.0kb upstream 4110   true Lsat_1_v8_lg_9: 41857946-41862055 Lactuca sativa
Lsat_1_v5_gn_9_38080 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 41860056-41862055 Lactuca sativa
Lsat_1_v5_gn_9_38080 2.0kb downstream 2.0kb downstream 4110   true Lsat_1_v8_lg_9: 41855946-41860055 Lactuca sativa
Lsat_1_v5_gn_9_38080 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 41855946-41857945 Lactuca sativa
Lsat_1_v5_gn_9_38080 5.0kb upstream 5.0kb upstream 7110   true Lsat_1_v8_lg_9: 41857946-41865055 Lactuca sativa
Lsat_1_v5_gn_9_38080 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 41860056-41865055 Lactuca sativa
Lsat_1_v5_gn_9_38080 5.0kb downstream 5.0kb downstream 7110   true Lsat_1_v8_lg_9: 41852946-41860055 Lactuca sativa
Lsat_1_v5_gn_9_38080 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 41852946-41857945 Lactuca sativa
Lsat_1_v5_gn_9_38080 10.0kb upstream 10.0kb upstream 12110   true Lsat_1_v8_lg_9: 41857946-41870055 Lactuca sativa
Lsat_1_v5_gn_9_38080 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 41860056-41870055 Lactuca sativa
Lsat_1_v5_gn_9_38080 10.0kb downstream 10.0kb downstream 12110   true Lsat_1_v8_lg_9: 41847946-41860055 Lactuca sativa
Lsat_1_v5_gn_9_38080 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 41847946-41857945 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029223 5273 Angiosperm View MSA
121474031 5263 Asterids View MSA
123746754 5271 Pentapetalae View MSA
122790978 5272 Eudicot View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain