Gene : Lsat_1_v5_gn_9_37781 L. sativa V8
Defline:  (1 of 12) PF01823 - MAC/Perforin domain (MACPF) Genomic Order:  1252
Name:  ? Lsat_1_v5_gn_9_37781 Secondary Identifier:  ? PAC:38923103
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_37781 0.5kb upstream 0.5kb upstream 4593   true Lsat_1_v8_lg_9: 42180403-42184995 Lactuca sativa
Lsat_1_v5_gn_9_37781 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 42180403-42180902 Lactuca sativa
Lsat_1_v5_gn_9_37781 0.5kb downstream 0.5kb downstream 4593   true Lsat_1_v8_lg_9: 42180903-42185495 Lactuca sativa
Lsat_1_v5_gn_9_37781 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 42184996-42185495 Lactuca sativa
Lsat_1_v5_gn_9_37781 1.0kb upstream 1.0kb upstream 5093   true Lsat_1_v8_lg_9: 42179903-42184995 Lactuca sativa
Lsat_1_v5_gn_9_37781 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 42179903-42180902 Lactuca sativa
Lsat_1_v5_gn_9_37781 1.0kb downstream 1.0kb downstream 5093   true Lsat_1_v8_lg_9: 42180903-42185995 Lactuca sativa
Lsat_1_v5_gn_9_37781 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 42184996-42185995 Lactuca sativa
Lsat_1_v5_gn_9_37781 2.0kb upstream 2.0kb upstream 6093   true Lsat_1_v8_lg_9: 42178903-42184995 Lactuca sativa
Lsat_1_v5_gn_9_37781 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 42178903-42180902 Lactuca sativa
Lsat_1_v5_gn_9_37781 2.0kb downstream 2.0kb downstream 6093   true Lsat_1_v8_lg_9: 42180903-42186995 Lactuca sativa
Lsat_1_v5_gn_9_37781 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 42184996-42186995 Lactuca sativa
Lsat_1_v5_gn_9_37781 5.0kb upstream 5.0kb upstream 9093   true Lsat_1_v8_lg_9: 42175903-42184995 Lactuca sativa
Lsat_1_v5_gn_9_37781 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 42175903-42180902 Lactuca sativa
Lsat_1_v5_gn_9_37781 5.0kb downstream 5.0kb downstream 9093   true Lsat_1_v8_lg_9: 42180903-42189995 Lactuca sativa
Lsat_1_v5_gn_9_37781 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 42184996-42189995 Lactuca sativa
Lsat_1_v5_gn_9_37781 10.0kb upstream 10.0kb upstream 14093   true Lsat_1_v8_lg_9: 42170903-42184995 Lactuca sativa
Lsat_1_v5_gn_9_37781 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 42170903-42180902 Lactuca sativa
Lsat_1_v5_gn_9_37781 10.0kb downstream 10.0kb downstream 14093   true Lsat_1_v8_lg_9: 42180903-42194995 Lactuca sativa
Lsat_1_v5_gn_9_37781 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 42184996-42194995 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466666 5263 Asterids View MSA
123741533 5271 Pentapetalae View MSA
122797212 5272 Eudicot View MSA
122044022 5273 Angiosperm View MSA
121349025 5274 Embryophyte View MSA
123381129 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain