Gene : Lsat_1_v5_gn_9_39901 L. sativa V8
Defline:  (1 of 1) PTHR31419:SF1 - AUXIN EFFLUX CARRIER FAMILY PROTEIN Genomic Order:  1302
Name:  ? Lsat_1_v5_gn_9_39901 Secondary Identifier:  ? PAC:38924666
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_39901 0.5kb upstream 0.5kb upstream 3767   true Lsat_1_v8_lg_9: 44261760-44265526 Lactuca sativa
Lsat_1_v5_gn_9_39901 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 44261760-44262259 Lactuca sativa
Lsat_1_v5_gn_9_39901 0.5kb downstream 0.5kb downstream 3767   true Lsat_1_v8_lg_9: 44262260-44266026 Lactuca sativa
Lsat_1_v5_gn_9_39901 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 44265527-44266026 Lactuca sativa
Lsat_1_v5_gn_9_39901 1.0kb upstream 1.0kb upstream 4267   true Lsat_1_v8_lg_9: 44261260-44265526 Lactuca sativa
Lsat_1_v5_gn_9_39901 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 44261260-44262259 Lactuca sativa
Lsat_1_v5_gn_9_39901 1.0kb downstream 1.0kb downstream 4267   true Lsat_1_v8_lg_9: 44262260-44266526 Lactuca sativa
Lsat_1_v5_gn_9_39901 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 44265527-44266526 Lactuca sativa
Lsat_1_v5_gn_9_39901 2.0kb upstream 2.0kb upstream 5267   true Lsat_1_v8_lg_9: 44260260-44265526 Lactuca sativa
Lsat_1_v5_gn_9_39901 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 44260260-44262259 Lactuca sativa
Lsat_1_v5_gn_9_39901 2.0kb downstream 2.0kb downstream 5267   true Lsat_1_v8_lg_9: 44262260-44267526 Lactuca sativa
Lsat_1_v5_gn_9_39901 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 44265527-44267526 Lactuca sativa
Lsat_1_v5_gn_9_39901 5.0kb upstream 5.0kb upstream 8267   true Lsat_1_v8_lg_9: 44257260-44265526 Lactuca sativa
Lsat_1_v5_gn_9_39901 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 44257260-44262259 Lactuca sativa
Lsat_1_v5_gn_9_39901 5.0kb downstream 5.0kb downstream 8267   true Lsat_1_v8_lg_9: 44262260-44270526 Lactuca sativa
Lsat_1_v5_gn_9_39901 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 44265527-44270526 Lactuca sativa
Lsat_1_v5_gn_9_39901 10.0kb upstream 10.0kb upstream 13267   true Lsat_1_v8_lg_9: 44252260-44265526 Lactuca sativa
Lsat_1_v5_gn_9_39901 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 44252260-44262259 Lactuca sativa
Lsat_1_v5_gn_9_39901 10.0kb downstream 10.0kb downstream 13267   true Lsat_1_v8_lg_9: 44262260-44275526 Lactuca sativa
Lsat_1_v5_gn_9_39901 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 44265527-44275526 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467722 5263 Asterids View MSA
123737155 5271 Pentapetalae View MSA
122792585 5272 Eudicot View MSA
122041596 5273 Angiosperm View MSA
123429004 5275 Viridiplantae View MSA
121347330 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain