Gene : Lsat_1_v5_gn_9_41700 L. sativa V8
Defline:  (1 of 2) K12118 - cryptochrome 1 (CRY1) Genomic Order:  1452
Name:  ? Lsat_1_v5_gn_9_41700 Secondary Identifier:  ? PAC:38925024
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_41700 0.5kb upstream 0.5kb upstream 6711   true Lsat_1_v8_lg_9: 49430624-49437334 Lactuca sativa
Lsat_1_v5_gn_9_41700 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 49430624-49431123 Lactuca sativa
Lsat_1_v5_gn_9_41700 0.5kb downstream 0.5kb downstream 6711   true Lsat_1_v8_lg_9: 49431124-49437834 Lactuca sativa
Lsat_1_v5_gn_9_41700 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 49437335-49437834 Lactuca sativa
Lsat_1_v5_gn_9_41700 1.0kb upstream 1.0kb upstream 7211   true Lsat_1_v8_lg_9: 49430124-49437334 Lactuca sativa
Lsat_1_v5_gn_9_41700 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 49430124-49431123 Lactuca sativa
Lsat_1_v5_gn_9_41700 1.0kb downstream 1.0kb downstream 7211   true Lsat_1_v8_lg_9: 49431124-49438334 Lactuca sativa
Lsat_1_v5_gn_9_41700 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 49437335-49438334 Lactuca sativa
Lsat_1_v5_gn_9_41700 2.0kb upstream 2.0kb upstream 8211   true Lsat_1_v8_lg_9: 49429124-49437334 Lactuca sativa
Lsat_1_v5_gn_9_41700 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 49429124-49431123 Lactuca sativa
Lsat_1_v5_gn_9_41700 2.0kb downstream 2.0kb downstream 8211   true Lsat_1_v8_lg_9: 49431124-49439334 Lactuca sativa
Lsat_1_v5_gn_9_41700 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 49437335-49439334 Lactuca sativa
Lsat_1_v5_gn_9_41700 5.0kb upstream 5.0kb upstream 11211   true Lsat_1_v8_lg_9: 49426124-49437334 Lactuca sativa
Lsat_1_v5_gn_9_41700 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 49426124-49431123 Lactuca sativa
Lsat_1_v5_gn_9_41700 5.0kb downstream 5.0kb downstream 11211   true Lsat_1_v8_lg_9: 49431124-49442334 Lactuca sativa
Lsat_1_v5_gn_9_41700 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 49437335-49442334 Lactuca sativa
Lsat_1_v5_gn_9_41700 10.0kb upstream 10.0kb upstream 16211   true Lsat_1_v8_lg_9: 49421124-49437334 Lactuca sativa
Lsat_1_v5_gn_9_41700 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 49421124-49431123 Lactuca sativa
Lsat_1_v5_gn_9_41700 10.0kb downstream 10.0kb downstream 16211   true Lsat_1_v8_lg_9: 49431124-49447334 Lactuca sativa
Lsat_1_v5_gn_9_41700 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 49437335-49447334 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467356 5263 Asterids View MSA
123736970 5271 Pentapetalae View MSA
122788964 5272 Eudicot View MSA
122048329 5273 Angiosperm View MSA
121343845 5274 Embryophyte View MSA
123428792 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain