Gene : Lsat_1_v5_gn_9_41220 L. sativa V8
Defline:  (1 of 2) 2.4.1.12//2.4.1.29 - Cellulose synthase (UDP-forming) / UDP-glucose-cellulose glucosyltransferase // Cellulose synthase (GDP-forming) / GDP-glucose-cellulose glucosyltransferase Genomic Order:  1346
Name:  ? Lsat_1_v5_gn_9_41220 Secondary Identifier:  ? PAC:38927745
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-1001 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_41220 0.5kb upstream 0.5kb upstream 6013   true Lsat_1_v8_lg_9: 45385256-45391268 Lactuca sativa
Lsat_1_v5_gn_9_41220 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 45385256-45385755 Lactuca sativa
Lsat_1_v5_gn_9_41220 0.5kb downstream 0.5kb downstream 6013   true Lsat_1_v8_lg_9: 45385756-45391768 Lactuca sativa
Lsat_1_v5_gn_9_41220 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 45391269-45391768 Lactuca sativa
Lsat_1_v5_gn_9_41220 1.0kb upstream 1.0kb upstream 6513   true Lsat_1_v8_lg_9: 45384756-45391268 Lactuca sativa
Lsat_1_v5_gn_9_41220 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 45384756-45385755 Lactuca sativa
Lsat_1_v5_gn_9_41220 1.0kb downstream 1.0kb downstream 6513   true Lsat_1_v8_lg_9: 45385756-45392268 Lactuca sativa
Lsat_1_v5_gn_9_41220 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 45391269-45392268 Lactuca sativa
Lsat_1_v5_gn_9_41220 2.0kb upstream 2.0kb upstream 7513   true Lsat_1_v8_lg_9: 45383756-45391268 Lactuca sativa
Lsat_1_v5_gn_9_41220 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 45383756-45385755 Lactuca sativa
Lsat_1_v5_gn_9_41220 2.0kb downstream 2.0kb downstream 7513   true Lsat_1_v8_lg_9: 45385756-45393268 Lactuca sativa
Lsat_1_v5_gn_9_41220 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 45391269-45393268 Lactuca sativa
Lsat_1_v5_gn_9_41220 5.0kb upstream 5.0kb upstream 10513   true Lsat_1_v8_lg_9: 45380756-45391268 Lactuca sativa
Lsat_1_v5_gn_9_41220 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 45380756-45385755 Lactuca sativa
Lsat_1_v5_gn_9_41220 5.0kb downstream 5.0kb downstream 10513   true Lsat_1_v8_lg_9: 45385756-45396268 Lactuca sativa
Lsat_1_v5_gn_9_41220 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 45391269-45396268 Lactuca sativa
Lsat_1_v5_gn_9_41220 10.0kb upstream 10.0kb upstream 15513   true Lsat_1_v8_lg_9: 45375756-45391268 Lactuca sativa
Lsat_1_v5_gn_9_41220 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 45375756-45385755 Lactuca sativa
Lsat_1_v5_gn_9_41220 10.0kb downstream 10.0kb downstream 15513   true Lsat_1_v8_lg_9: 45385756-45401268 Lactuca sativa
Lsat_1_v5_gn_9_41220 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 45391269-45401268 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474349 5263 Asterids View MSA
123747849 5271 Pentapetalae View MSA
122795199 5272 Eudicot View MSA
122048668 5273 Angiosperm View MSA
121351501 5274 Embryophyte View MSA
123382193 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain