Gene : Lsat_1_v5_gn_9_42421 L. sativa V8
Defline:  (1 of 1) 2.4.2.8 - Hypoxanthine phosphoribosyltransferase / Transphosphoribosidase Genomic Order:  1368
Name:  ? Lsat_1_v5_gn_9_42421 Secondary Identifier:  ? PAC:38925274
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-6599 Lactuca sativa pathologic  
Lsativa PWY-6609 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_42421 0.5kb upstream 0.5kb upstream 2230   true Lsat_1_v8_lg_9: 45927831-45930060 Lactuca sativa
Lsat_1_v5_gn_9_42421 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 45929561-45930060 Lactuca sativa
Lsat_1_v5_gn_9_42421 0.5kb downstream 0.5kb downstream 2230   true Lsat_1_v8_lg_9: 45927331-45929560 Lactuca sativa
Lsat_1_v5_gn_9_42421 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 45927331-45927830 Lactuca sativa
Lsat_1_v5_gn_9_42421 1.0kb upstream 1.0kb upstream 2730   true Lsat_1_v8_lg_9: 45927831-45930560 Lactuca sativa
Lsat_1_v5_gn_9_42421 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 45929561-45930560 Lactuca sativa
Lsat_1_v5_gn_9_42421 1.0kb downstream 1.0kb downstream 2730   true Lsat_1_v8_lg_9: 45926831-45929560 Lactuca sativa
Lsat_1_v5_gn_9_42421 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 45926831-45927830 Lactuca sativa
Lsat_1_v5_gn_9_42421 2.0kb upstream 2.0kb upstream 3730   true Lsat_1_v8_lg_9: 45927831-45931560 Lactuca sativa
Lsat_1_v5_gn_9_42421 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 45929561-45931560 Lactuca sativa
Lsat_1_v5_gn_9_42421 2.0kb downstream 2.0kb downstream 3730   true Lsat_1_v8_lg_9: 45925831-45929560 Lactuca sativa
Lsat_1_v5_gn_9_42421 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 45925831-45927830 Lactuca sativa
Lsat_1_v5_gn_9_42421 5.0kb upstream 5.0kb upstream 6730   true Lsat_1_v8_lg_9: 45927831-45934560 Lactuca sativa
Lsat_1_v5_gn_9_42421 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 45929561-45934560 Lactuca sativa
Lsat_1_v5_gn_9_42421 5.0kb downstream 5.0kb downstream 6730   true Lsat_1_v8_lg_9: 45922831-45929560 Lactuca sativa
Lsat_1_v5_gn_9_42421 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 45922831-45927830 Lactuca sativa
Lsat_1_v5_gn_9_42421 10.0kb upstream 10.0kb upstream 11730   true Lsat_1_v8_lg_9: 45927831-45939560 Lactuca sativa
Lsat_1_v5_gn_9_42421 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 45929561-45939560 Lactuca sativa
Lsat_1_v5_gn_9_42421 10.0kb downstream 10.0kb downstream 11730   true Lsat_1_v8_lg_9: 45917831-45929560 Lactuca sativa
Lsat_1_v5_gn_9_42421 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 45917831-45927830 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466408 5263 Asterids View MSA
123736484 5271 Pentapetalae View MSA
122787772 5272 Eudicot View MSA
122042893 5273 Angiosperm View MSA
121347009 5274 Embryophyte View MSA
123425408 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain