Gene : Lsat_1_v5_gn_9_43580 L. sativa V8
Defline:  (1 of 3) PTHR31614//PTHR31614:SF5 - FAMILY NOT NAMED // ALLERGEN-LIKE PROTEIN BRSN20-RELATED Genomic Order:  1430
Name:  ? Lsat_1_v5_gn_9_43580 Secondary Identifier:  ? PAC:38922299
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_43580 0.5kb upstream 0.5kb upstream 1644   true Lsat_1_v8_lg_9: 48037965-48039608 Lactuca sativa
Lsat_1_v5_gn_9_43580 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 48037965-48038464 Lactuca sativa
Lsat_1_v5_gn_9_43580 0.5kb downstream 0.5kb downstream 1644   true Lsat_1_v8_lg_9: 48038465-48040108 Lactuca sativa
Lsat_1_v5_gn_9_43580 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 48039609-48040108 Lactuca sativa
Lsat_1_v5_gn_9_43580 1.0kb upstream 1.0kb upstream 2144   true Lsat_1_v8_lg_9: 48037465-48039608 Lactuca sativa
Lsat_1_v5_gn_9_43580 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 48037465-48038464 Lactuca sativa
Lsat_1_v5_gn_9_43580 1.0kb downstream 1.0kb downstream 2144   true Lsat_1_v8_lg_9: 48038465-48040608 Lactuca sativa
Lsat_1_v5_gn_9_43580 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 48039609-48040608 Lactuca sativa
Lsat_1_v5_gn_9_43580 2.0kb upstream 2.0kb upstream 3144   true Lsat_1_v8_lg_9: 48036465-48039608 Lactuca sativa
Lsat_1_v5_gn_9_43580 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 48036465-48038464 Lactuca sativa
Lsat_1_v5_gn_9_43580 2.0kb downstream 2.0kb downstream 3144   true Lsat_1_v8_lg_9: 48038465-48041608 Lactuca sativa
Lsat_1_v5_gn_9_43580 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 48039609-48041608 Lactuca sativa
Lsat_1_v5_gn_9_43580 5.0kb upstream 5.0kb upstream 6144   true Lsat_1_v8_lg_9: 48033465-48039608 Lactuca sativa
Lsat_1_v5_gn_9_43580 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 48033465-48038464 Lactuca sativa
Lsat_1_v5_gn_9_43580 5.0kb downstream 5.0kb downstream 6144   true Lsat_1_v8_lg_9: 48038465-48044608 Lactuca sativa
Lsat_1_v5_gn_9_43580 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 48039609-48044608 Lactuca sativa
Lsat_1_v5_gn_9_43580 10.0kb upstream 10.0kb upstream 11144   true Lsat_1_v8_lg_9: 48028465-48039608 Lactuca sativa
Lsat_1_v5_gn_9_43580 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 48028465-48038464 Lactuca sativa
Lsat_1_v5_gn_9_43580 10.0kb downstream 10.0kb downstream 11144   true Lsat_1_v8_lg_9: 48038465-48049608 Lactuca sativa
Lsat_1_v5_gn_9_43580 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 48039609-48049608 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121476605 5263 Asterids View MSA
123742086 5271 Pentapetalae View MSA
122796154 5272 Eudicot View MSA
122045197 5273 Angiosperm View MSA
121310413 5274 Embryophyte View MSA
123347903 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain