Gene : Lsat_1_v5_gn_9_43381 L. sativa V8
Defline:  (1 of 9) PTHR13169 - UBIQUITIN-LIKE PROTEIN 3 HCG-1 PROTEIN Genomic Order:  1404
Name:  ? Lsat_1_v5_gn_9_43381 Secondary Identifier:  ? PAC:38927856
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_43381 0.5kb upstream 0.5kb upstream 2270   true Lsat_1_v8_lg_9: 46717583-46719852 Lactuca sativa
Lsat_1_v5_gn_9_43381 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 46719353-46719852 Lactuca sativa
Lsat_1_v5_gn_9_43381 0.5kb downstream 0.5kb downstream 2270   true Lsat_1_v8_lg_9: 46717083-46719352 Lactuca sativa
Lsat_1_v5_gn_9_43381 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 46717083-46717582 Lactuca sativa
Lsat_1_v5_gn_9_43381 1.0kb upstream 1.0kb upstream 2770   true Lsat_1_v8_lg_9: 46717583-46720352 Lactuca sativa
Lsat_1_v5_gn_9_43381 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 46719353-46720352 Lactuca sativa
Lsat_1_v5_gn_9_43381 1.0kb downstream 1.0kb downstream 2770   true Lsat_1_v8_lg_9: 46716583-46719352 Lactuca sativa
Lsat_1_v5_gn_9_43381 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 46716583-46717582 Lactuca sativa
Lsat_1_v5_gn_9_43381 2.0kb upstream 2.0kb upstream 3770   true Lsat_1_v8_lg_9: 46717583-46721352 Lactuca sativa
Lsat_1_v5_gn_9_43381 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 46719353-46721352 Lactuca sativa
Lsat_1_v5_gn_9_43381 2.0kb downstream 2.0kb downstream 3770   true Lsat_1_v8_lg_9: 46715583-46719352 Lactuca sativa
Lsat_1_v5_gn_9_43381 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 46715583-46717582 Lactuca sativa
Lsat_1_v5_gn_9_43381 5.0kb upstream 5.0kb upstream 6770   true Lsat_1_v8_lg_9: 46717583-46724352 Lactuca sativa
Lsat_1_v5_gn_9_43381 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 46719353-46724352 Lactuca sativa
Lsat_1_v5_gn_9_43381 5.0kb downstream 5.0kb downstream 6770   true Lsat_1_v8_lg_9: 46712583-46719352 Lactuca sativa
Lsat_1_v5_gn_9_43381 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 46712583-46717582 Lactuca sativa
Lsat_1_v5_gn_9_43381 10.0kb upstream 10.0kb upstream 11770   true Lsat_1_v8_lg_9: 46717583-46729352 Lactuca sativa
Lsat_1_v5_gn_9_43381 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 46719353-46729352 Lactuca sativa
Lsat_1_v5_gn_9_43381 10.0kb downstream 10.0kb downstream 11770   true Lsat_1_v8_lg_9: 46707583-46719352 Lactuca sativa
Lsat_1_v5_gn_9_43381 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 46707583-46717582 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121449814 5263 Asterids Singleton cluster - no MSA
123744059 5271 Pentapetalae View MSA
122795764 5272 Eudicot View MSA
122050739 5273 Angiosperm View MSA
121344338 5274 Embryophyte View MSA
123427741 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain