Gene : Lsat_1_v5_gn_9_45780 L. sativa V8
Defline:  (1 of 2) PTHR16684 - CENTROMERE PROTEIN C Genomic Order:  1527
Name:  ? Lsat_1_v5_gn_9_45780 Secondary Identifier:  ? PAC:38926385
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_45780 0.5kb upstream 0.5kb upstream 4966   true Lsat_1_v8_lg_9: 51591911-51596876 Lactuca sativa
Lsat_1_v5_gn_9_45780 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 51596377-51596876 Lactuca sativa
Lsat_1_v5_gn_9_45780 0.5kb downstream 0.5kb downstream 4966   true Lsat_1_v8_lg_9: 51591411-51596376 Lactuca sativa
Lsat_1_v5_gn_9_45780 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 51591411-51591910 Lactuca sativa
Lsat_1_v5_gn_9_45780 1.0kb upstream 1.0kb upstream 5466   true Lsat_1_v8_lg_9: 51591911-51597376 Lactuca sativa
Lsat_1_v5_gn_9_45780 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 51596377-51597376 Lactuca sativa
Lsat_1_v5_gn_9_45780 1.0kb downstream 1.0kb downstream 5466   true Lsat_1_v8_lg_9: 51590911-51596376 Lactuca sativa
Lsat_1_v5_gn_9_45780 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 51590911-51591910 Lactuca sativa
Lsat_1_v5_gn_9_45780 2.0kb upstream 2.0kb upstream 6466   true Lsat_1_v8_lg_9: 51591911-51598376 Lactuca sativa
Lsat_1_v5_gn_9_45780 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 51596377-51598376 Lactuca sativa
Lsat_1_v5_gn_9_45780 2.0kb downstream 2.0kb downstream 6466   true Lsat_1_v8_lg_9: 51589911-51596376 Lactuca sativa
Lsat_1_v5_gn_9_45780 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 51589911-51591910 Lactuca sativa
Lsat_1_v5_gn_9_45780 5.0kb upstream 5.0kb upstream 9466   true Lsat_1_v8_lg_9: 51591911-51601376 Lactuca sativa
Lsat_1_v5_gn_9_45780 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 51596377-51601376 Lactuca sativa
Lsat_1_v5_gn_9_45780 5.0kb downstream 5.0kb downstream 9466   true Lsat_1_v8_lg_9: 51586911-51596376 Lactuca sativa
Lsat_1_v5_gn_9_45780 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 51586911-51591910 Lactuca sativa
Lsat_1_v5_gn_9_45780 10.0kb upstream 10.0kb upstream 14466   true Lsat_1_v8_lg_9: 51591911-51606376 Lactuca sativa
Lsat_1_v5_gn_9_45780 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 51596377-51606376 Lactuca sativa
Lsat_1_v5_gn_9_45780 10.0kb downstream 10.0kb downstream 14466   true Lsat_1_v8_lg_9: 51581911-51596376 Lactuca sativa
Lsat_1_v5_gn_9_45780 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 51581911-51591910 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478076 5263 Asterids View MSA
123738687 5271 Pentapetalae View MSA
122788582 5272 Eudicot View MSA
122045185 5273 Angiosperm View MSA
121350045 5274 Embryophyte View MSA
123426660 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain