Gene : Lsat_1_v5_gn_9_45300 L. sativa V8
Defline:  (1 of 6) PF13704 - Glycosyl transferase family 2 (Glyco_tranf_2_4) Genomic Order:  1477
Name:  ? Lsat_1_v5_gn_9_45300 Secondary Identifier:  ? PAC:38922604
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_45300 0.5kb upstream 0.5kb upstream 2593   true Lsat_1_v8_lg_9: 49944095-49946687 Lactuca sativa
Lsat_1_v5_gn_9_45300 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 49946188-49946687 Lactuca sativa
Lsat_1_v5_gn_9_45300 0.5kb downstream 0.5kb downstream 2593   true Lsat_1_v8_lg_9: 49943595-49946187 Lactuca sativa
Lsat_1_v5_gn_9_45300 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 49943595-49944094 Lactuca sativa
Lsat_1_v5_gn_9_45300 1.0kb upstream 1.0kb upstream 3093   true Lsat_1_v8_lg_9: 49944095-49947187 Lactuca sativa
Lsat_1_v5_gn_9_45300 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 49946188-49947187 Lactuca sativa
Lsat_1_v5_gn_9_45300 1.0kb downstream 1.0kb downstream 3093   true Lsat_1_v8_lg_9: 49943095-49946187 Lactuca sativa
Lsat_1_v5_gn_9_45300 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 49943095-49944094 Lactuca sativa
Lsat_1_v5_gn_9_45300 2.0kb upstream 2.0kb upstream 4093   true Lsat_1_v8_lg_9: 49944095-49948187 Lactuca sativa
Lsat_1_v5_gn_9_45300 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 49946188-49948187 Lactuca sativa
Lsat_1_v5_gn_9_45300 2.0kb downstream 2.0kb downstream 4093   true Lsat_1_v8_lg_9: 49942095-49946187 Lactuca sativa
Lsat_1_v5_gn_9_45300 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 49942095-49944094 Lactuca sativa
Lsat_1_v5_gn_9_45300 5.0kb upstream 5.0kb upstream 7093   true Lsat_1_v8_lg_9: 49944095-49951187 Lactuca sativa
Lsat_1_v5_gn_9_45300 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 49946188-49951187 Lactuca sativa
Lsat_1_v5_gn_9_45300 5.0kb downstream 5.0kb downstream 7093   true Lsat_1_v8_lg_9: 49939095-49946187 Lactuca sativa
Lsat_1_v5_gn_9_45300 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 49939095-49944094 Lactuca sativa
Lsat_1_v5_gn_9_45300 10.0kb upstream 10.0kb upstream 12093   true Lsat_1_v8_lg_9: 49944095-49956187 Lactuca sativa
Lsat_1_v5_gn_9_45300 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 49946188-49956187 Lactuca sativa
Lsat_1_v5_gn_9_45300 10.0kb downstream 10.0kb downstream 12093   true Lsat_1_v8_lg_9: 49934095-49946187 Lactuca sativa
Lsat_1_v5_gn_9_45300 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 49934095-49944094 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121472571 5263 Asterids View MSA
123747908 5271 Pentapetalae View MSA
122796800 5272 Eudicot View MSA
122042100 5273 Angiosperm View MSA
123428981 5275 Viridiplantae View MSA
121349408 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain