Gene : Lsat_1_v5_gn_9_46040 L. sativa V8
Defline:  (1 of 1) K13156 - U11/U12 small nuclear ribonucleoprotein 48 kDa protein (SNRNP48) Genomic Order:  1518
Name:  ? Lsat_1_v5_gn_9_46040 Secondary Identifier:  ? PAC:38922401
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_46040 0.5kb upstream 0.5kb upstream 3487   true Lsat_1_v8_lg_9: 51378825-51382311 Lactuca sativa
Lsat_1_v5_gn_9_46040 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 51381812-51382311 Lactuca sativa
Lsat_1_v5_gn_9_46040 0.5kb downstream 0.5kb downstream 3487   true Lsat_1_v8_lg_9: 51378325-51381811 Lactuca sativa
Lsat_1_v5_gn_9_46040 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 51378325-51378824 Lactuca sativa
Lsat_1_v5_gn_9_46040 1.0kb upstream 1.0kb upstream 3987   true Lsat_1_v8_lg_9: 51378825-51382811 Lactuca sativa
Lsat_1_v5_gn_9_46040 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 51381812-51382811 Lactuca sativa
Lsat_1_v5_gn_9_46040 1.0kb downstream 1.0kb downstream 3987   true Lsat_1_v8_lg_9: 51377825-51381811 Lactuca sativa
Lsat_1_v5_gn_9_46040 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 51377825-51378824 Lactuca sativa
Lsat_1_v5_gn_9_46040 2.0kb upstream 2.0kb upstream 4987   true Lsat_1_v8_lg_9: 51378825-51383811 Lactuca sativa
Lsat_1_v5_gn_9_46040 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 51381812-51383811 Lactuca sativa
Lsat_1_v5_gn_9_46040 2.0kb downstream 2.0kb downstream 4987   true Lsat_1_v8_lg_9: 51376825-51381811 Lactuca sativa
Lsat_1_v5_gn_9_46040 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 51376825-51378824 Lactuca sativa
Lsat_1_v5_gn_9_46040 5.0kb upstream 5.0kb upstream 7987   true Lsat_1_v8_lg_9: 51378825-51386811 Lactuca sativa
Lsat_1_v5_gn_9_46040 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 51381812-51386811 Lactuca sativa
Lsat_1_v5_gn_9_46040 5.0kb downstream 5.0kb downstream 7987   true Lsat_1_v8_lg_9: 51373825-51381811 Lactuca sativa
Lsat_1_v5_gn_9_46040 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 51373825-51378824 Lactuca sativa
Lsat_1_v5_gn_9_46040 10.0kb upstream 10.0kb upstream 12987   true Lsat_1_v8_lg_9: 51378825-51391811 Lactuca sativa
Lsat_1_v5_gn_9_46040 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 51381812-51391811 Lactuca sativa
Lsat_1_v5_gn_9_46040 10.0kb downstream 10.0kb downstream 12987   true Lsat_1_v8_lg_9: 51368825-51381811 Lactuca sativa
Lsat_1_v5_gn_9_46040 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 51368825-51378824 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474962 5263 Asterids View MSA
123740826 5271 Pentapetalae View MSA
122788385 5272 Eudicot View MSA
122044714 5273 Angiosperm View MSA
121344837 5274 Embryophyte View MSA
123380110 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain