Gene : Lsat_1_v5_gn_9_4800 L. sativa V8
Defline:  (1 of 1) PTHR10381//PTHR10381:SF12 - ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT // ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 5, CHLOROPLASTIC Genomic Order:  115
Name:  ? Lsat_1_v5_gn_9_4800 Secondary Identifier:  ? PAC:38925599
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_4800 0.5kb upstream 0.5kb upstream 2920   true Lsat_1_v8_lg_9: 3345029-3347948 Lactuca sativa
Lsat_1_v5_gn_9_4800 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 3347449-3347948 Lactuca sativa
Lsat_1_v5_gn_9_4800 0.5kb downstream 0.5kb downstream 2920   true Lsat_1_v8_lg_9: 3344529-3347448 Lactuca sativa
Lsat_1_v5_gn_9_4800 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 3344529-3345028 Lactuca sativa
Lsat_1_v5_gn_9_4800 1.0kb upstream 1.0kb upstream 3420   true Lsat_1_v8_lg_9: 3345029-3348448 Lactuca sativa
Lsat_1_v5_gn_9_4800 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 3347449-3348448 Lactuca sativa
Lsat_1_v5_gn_9_4800 1.0kb downstream 1.0kb downstream 3420   true Lsat_1_v8_lg_9: 3344029-3347448 Lactuca sativa
Lsat_1_v5_gn_9_4800 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 3344029-3345028 Lactuca sativa
Lsat_1_v5_gn_9_4800 2.0kb upstream 2.0kb upstream 4420   true Lsat_1_v8_lg_9: 3345029-3349448 Lactuca sativa
Lsat_1_v5_gn_9_4800 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 3347449-3349448 Lactuca sativa
Lsat_1_v5_gn_9_4800 2.0kb downstream 2.0kb downstream 4420   true Lsat_1_v8_lg_9: 3343029-3347448 Lactuca sativa
Lsat_1_v5_gn_9_4800 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 3343029-3345028 Lactuca sativa
Lsat_1_v5_gn_9_4800 5.0kb upstream 5.0kb upstream 7420   true Lsat_1_v8_lg_9: 3345029-3352448 Lactuca sativa
Lsat_1_v5_gn_9_4800 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 3347449-3352448 Lactuca sativa
Lsat_1_v5_gn_9_4800 5.0kb downstream 5.0kb downstream 7420   true Lsat_1_v8_lg_9: 3340029-3347448 Lactuca sativa
Lsat_1_v5_gn_9_4800 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 3340029-3345028 Lactuca sativa
Lsat_1_v5_gn_9_4800 10.0kb upstream 10.0kb upstream 12420   true Lsat_1_v8_lg_9: 3345029-3357448 Lactuca sativa
Lsat_1_v5_gn_9_4800 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 3347449-3357448 Lactuca sativa
Lsat_1_v5_gn_9_4800 10.0kb downstream 10.0kb downstream 12420   true Lsat_1_v8_lg_9: 3335029-3347448 Lactuca sativa
Lsat_1_v5_gn_9_4800 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 3335029-3345028 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121480057 5263 Asterids View MSA
123746339 5271 Pentapetalae View MSA
122771871 5272 Eudicot View MSA
122043333 5273 Angiosperm View MSA
121344238 5274 Embryophyte View MSA
123424888 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain