Gene : Lsat_1_v5_gn_9_4841 L. sativa V8
Defline:  (1 of 1) PTHR15657:SF1 - THYROID TRANSCRIPTION FACTOR 1-ASSOCIATED PROTEIN 26 Genomic Order:  5
Name:  ? Lsat_1_v5_gn_9_4841 Secondary Identifier:  ? PAC:38924633
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_4841 0.5kb upstream 0.5kb upstream 3261   true Lsat_1_v8_lg_9: 172367-175627 Lactuca sativa
Lsat_1_v5_gn_9_4841 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 172367-172866 Lactuca sativa
Lsat_1_v5_gn_9_4841 0.5kb downstream 0.5kb downstream 3261   true Lsat_1_v8_lg_9: 172867-176127 Lactuca sativa
Lsat_1_v5_gn_9_4841 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 175628-176127 Lactuca sativa
Lsat_1_v5_gn_9_4841 1.0kb upstream 1.0kb upstream 3761   true Lsat_1_v8_lg_9: 171867-175627 Lactuca sativa
Lsat_1_v5_gn_9_4841 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 171867-172866 Lactuca sativa
Lsat_1_v5_gn_9_4841 1.0kb downstream 1.0kb downstream 3761   true Lsat_1_v8_lg_9: 172867-176627 Lactuca sativa
Lsat_1_v5_gn_9_4841 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 175628-176627 Lactuca sativa
Lsat_1_v5_gn_9_4841 2.0kb upstream 2.0kb upstream 4761   true Lsat_1_v8_lg_9: 170867-175627 Lactuca sativa
Lsat_1_v5_gn_9_4841 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 170867-172866 Lactuca sativa
Lsat_1_v5_gn_9_4841 2.0kb downstream 2.0kb downstream 4761   true Lsat_1_v8_lg_9: 172867-177627 Lactuca sativa
Lsat_1_v5_gn_9_4841 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 175628-177627 Lactuca sativa
Lsat_1_v5_gn_9_4841 5.0kb upstream 5.0kb upstream 7761   true Lsat_1_v8_lg_9: 167867-175627 Lactuca sativa
Lsat_1_v5_gn_9_4841 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 167867-172866 Lactuca sativa
Lsat_1_v5_gn_9_4841 5.0kb downstream 5.0kb downstream 7761   true Lsat_1_v8_lg_9: 172867-180627 Lactuca sativa
Lsat_1_v5_gn_9_4841 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 175628-180627 Lactuca sativa
Lsat_1_v5_gn_9_4841 10.0kb upstream 10.0kb upstream 12761   true Lsat_1_v8_lg_9: 162867-175627 Lactuca sativa
Lsat_1_v5_gn_9_4841 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 162867-172866 Lactuca sativa
Lsat_1_v5_gn_9_4841 10.0kb downstream 10.0kb downstream 12761   true Lsat_1_v8_lg_9: 172867-185627 Lactuca sativa
Lsat_1_v5_gn_9_4841 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 175628-185627 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466276 5263 Asterids View MSA
123736421 5271 Pentapetalae View MSA
122791858 5272 Eudicot View MSA
122042448 5273 Angiosperm View MSA
121343985 5274 Embryophyte View MSA
123426667 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain