Gene : Lsat_1_v5_gn_9_98620 L. sativa V8
Defline:  (1 of 1) 1.13.11.5 - Homogentisate 1,2-dioxygenase / Homogentisicase Genomic Order:  3116
Name:  ? Lsat_1_v5_gn_9_98620 Secondary Identifier:  ? PAC:38926491
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_98620 0.5kb upstream 0.5kb upstream 4010   true Lsat_1_v8_lg_9: 157503197-157507206 Lactuca sativa
Lsat_1_v5_gn_9_98620 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 157503197-157503696 Lactuca sativa
Lsat_1_v5_gn_9_98620 0.5kb downstream 0.5kb downstream 4010   true Lsat_1_v8_lg_9: 157503697-157507706 Lactuca sativa
Lsat_1_v5_gn_9_98620 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 157507207-157507706 Lactuca sativa
Lsat_1_v5_gn_9_98620 1.0kb upstream 1.0kb upstream 4510   true Lsat_1_v8_lg_9: 157502697-157507206 Lactuca sativa
Lsat_1_v5_gn_9_98620 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 157502697-157503696 Lactuca sativa
Lsat_1_v5_gn_9_98620 1.0kb downstream 1.0kb downstream 4510   true Lsat_1_v8_lg_9: 157503697-157508206 Lactuca sativa
Lsat_1_v5_gn_9_98620 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 157507207-157508206 Lactuca sativa
Lsat_1_v5_gn_9_98620 2.0kb upstream 2.0kb upstream 5510   true Lsat_1_v8_lg_9: 157501697-157507206 Lactuca sativa
Lsat_1_v5_gn_9_98620 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 157501697-157503696 Lactuca sativa
Lsat_1_v5_gn_9_98620 2.0kb downstream 2.0kb downstream 5510   true Lsat_1_v8_lg_9: 157503697-157509206 Lactuca sativa
Lsat_1_v5_gn_9_98620 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 157507207-157509206 Lactuca sativa
Lsat_1_v5_gn_9_98620 5.0kb upstream 5.0kb upstream 8510   true Lsat_1_v8_lg_9: 157498697-157507206 Lactuca sativa
Lsat_1_v5_gn_9_98620 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 157498697-157503696 Lactuca sativa
Lsat_1_v5_gn_9_98620 5.0kb downstream 5.0kb downstream 8510   true Lsat_1_v8_lg_9: 157503697-157512206 Lactuca sativa
Lsat_1_v5_gn_9_98620 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 157507207-157512206 Lactuca sativa
Lsat_1_v5_gn_9_98620 10.0kb upstream 10.0kb upstream 13510   true Lsat_1_v8_lg_9: 157493697-157507206 Lactuca sativa
Lsat_1_v5_gn_9_98620 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 157493697-157503696 Lactuca sativa
Lsat_1_v5_gn_9_98620 10.0kb downstream 10.0kb downstream 13510   true Lsat_1_v8_lg_9: 157503697-157517206 Lactuca sativa
Lsat_1_v5_gn_9_98620 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 157507207-157517206 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474931 5263 Asterids View MSA
123740810 5271 Pentapetalae View MSA
122786399 5272 Eudicot View MSA
122042428 5273 Angiosperm View MSA
121346859 5274 Embryophyte View MSA
123424235 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain