Gene : Lsat_1_v5_gn_9_99800 L. sativa V8
Defline:  (1 of 2) PTHR22952//PTHR22952:SF210 - CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED // DOG1 ALPHA SPLICE VARIANT Genomic Order:  3156
Name:  ? Lsat_1_v5_gn_9_99800 Secondary Identifier:  ? PAC:38926152
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_99800 0.5kb upstream 0.5kb upstream 1392   true Lsat_1_v8_lg_9: 160012537-160013928 Lactuca sativa
Lsat_1_v5_gn_9_99800 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 160013429-160013928 Lactuca sativa
Lsat_1_v5_gn_9_99800 0.5kb downstream 0.5kb downstream 1392   true Lsat_1_v8_lg_9: 160012037-160013428 Lactuca sativa
Lsat_1_v5_gn_9_99800 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 160012037-160012536 Lactuca sativa
Lsat_1_v5_gn_9_99800 1.0kb upstream 1.0kb upstream 1892   true Lsat_1_v8_lg_9: 160012537-160014428 Lactuca sativa
Lsat_1_v5_gn_9_99800 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 160013429-160014428 Lactuca sativa
Lsat_1_v5_gn_9_99800 1.0kb downstream 1.0kb downstream 1892   true Lsat_1_v8_lg_9: 160011537-160013428 Lactuca sativa
Lsat_1_v5_gn_9_99800 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 160011537-160012536 Lactuca sativa
Lsat_1_v5_gn_9_99800 2.0kb upstream 2.0kb upstream 2892   true Lsat_1_v8_lg_9: 160012537-160015428 Lactuca sativa
Lsat_1_v5_gn_9_99800 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 160013429-160015428 Lactuca sativa
Lsat_1_v5_gn_9_99800 2.0kb downstream 2.0kb downstream 2892   true Lsat_1_v8_lg_9: 160010537-160013428 Lactuca sativa
Lsat_1_v5_gn_9_99800 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 160010537-160012536 Lactuca sativa
Lsat_1_v5_gn_9_99800 5.0kb upstream 5.0kb upstream 5892   true Lsat_1_v8_lg_9: 160012537-160018428 Lactuca sativa
Lsat_1_v5_gn_9_99800 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 160013429-160018428 Lactuca sativa
Lsat_1_v5_gn_9_99800 5.0kb downstream 5.0kb downstream 5892   true Lsat_1_v8_lg_9: 160007537-160013428 Lactuca sativa
Lsat_1_v5_gn_9_99800 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 160007537-160012536 Lactuca sativa
Lsat_1_v5_gn_9_99800 10.0kb upstream 10.0kb upstream 10892   true Lsat_1_v8_lg_9: 160012537-160023428 Lactuca sativa
Lsat_1_v5_gn_9_99800 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 160013429-160023428 Lactuca sativa
Lsat_1_v5_gn_9_99800 10.0kb downstream 10.0kb downstream 10892   true Lsat_1_v8_lg_9: 160002537-160013428 Lactuca sativa
Lsat_1_v5_gn_9_99800 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 160002537-160012536 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478737 5263 Asterids View MSA
123746178 5271 Pentapetalae View MSA
122797836 5272 Eudicot View MSA
122044806 5273 Angiosperm View MSA
121350176 5274 Embryophyte View MSA
123381607 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain