Gene : Lsat_1_v5_gn_9_99780 L. sativa V8
Defline:  (1 of 2) PTHR22952//PTHR22952:SF210 - CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED // DOG1 ALPHA SPLICE VARIANT Genomic Order:  3157
Name:  ? Lsat_1_v5_gn_9_99780 Secondary Identifier:  ? PAC:38924511
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_99780 0.5kb upstream 0.5kb upstream 1421   true Lsat_1_v8_lg_9: 160040541-160041961 Lactuca sativa
Lsat_1_v5_gn_9_99780 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 160041462-160041961 Lactuca sativa
Lsat_1_v5_gn_9_99780 0.5kb downstream 0.5kb downstream 1421   true Lsat_1_v8_lg_9: 160040041-160041461 Lactuca sativa
Lsat_1_v5_gn_9_99780 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 160040041-160040540 Lactuca sativa
Lsat_1_v5_gn_9_99780 1.0kb upstream 1.0kb upstream 1921   true Lsat_1_v8_lg_9: 160040541-160042461 Lactuca sativa
Lsat_1_v5_gn_9_99780 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 160041462-160042461 Lactuca sativa
Lsat_1_v5_gn_9_99780 1.0kb downstream 1.0kb downstream 1921   true Lsat_1_v8_lg_9: 160039541-160041461 Lactuca sativa
Lsat_1_v5_gn_9_99780 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 160039541-160040540 Lactuca sativa
Lsat_1_v5_gn_9_99780 2.0kb upstream 2.0kb upstream 2921   true Lsat_1_v8_lg_9: 160040541-160043461 Lactuca sativa
Lsat_1_v5_gn_9_99780 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 160041462-160043461 Lactuca sativa
Lsat_1_v5_gn_9_99780 2.0kb downstream 2.0kb downstream 2921   true Lsat_1_v8_lg_9: 160038541-160041461 Lactuca sativa
Lsat_1_v5_gn_9_99780 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 160038541-160040540 Lactuca sativa
Lsat_1_v5_gn_9_99780 5.0kb upstream 5.0kb upstream 5921   true Lsat_1_v8_lg_9: 160040541-160046461 Lactuca sativa
Lsat_1_v5_gn_9_99780 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 160041462-160046461 Lactuca sativa
Lsat_1_v5_gn_9_99780 5.0kb downstream 5.0kb downstream 5921   true Lsat_1_v8_lg_9: 160035541-160041461 Lactuca sativa
Lsat_1_v5_gn_9_99780 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 160035541-160040540 Lactuca sativa
Lsat_1_v5_gn_9_99780 10.0kb upstream 10.0kb upstream 10921   true Lsat_1_v8_lg_9: 160040541-160051461 Lactuca sativa
Lsat_1_v5_gn_9_99780 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 160041462-160051461 Lactuca sativa
Lsat_1_v5_gn_9_99780 10.0kb downstream 10.0kb downstream 10921   true Lsat_1_v8_lg_9: 160030541-160041461 Lactuca sativa
Lsat_1_v5_gn_9_99780 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 160030541-160040540 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478737 5263 Asterids View MSA
123746178 5271 Pentapetalae View MSA
122797836 5272 Eudicot View MSA
122044806 5273 Angiosperm View MSA
121350176 5274 Embryophyte View MSA
123381607 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain