Gene : Lsat_1_v5_gn_9_99500 L. sativa V8
Defline:  (1 of 2) K03152 - 4-methyl-5(b-hydroxyethyl)-thiazole monophosphate biosynthesis (thiJ) Genomic Order:  3126
Name:  ? Lsat_1_v5_gn_9_99500 Secondary Identifier:  ? PAC:38923158
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_99500 0.5kb upstream 0.5kb upstream 3379   true Lsat_1_v8_lg_9: 157866246-157869624 Lactuca sativa
Lsat_1_v5_gn_9_99500 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 157869125-157869624 Lactuca sativa
Lsat_1_v5_gn_9_99500 0.5kb downstream 0.5kb downstream 3379   true Lsat_1_v8_lg_9: 157865746-157869124 Lactuca sativa
Lsat_1_v5_gn_9_99500 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 157865746-157866245 Lactuca sativa
Lsat_1_v5_gn_9_99500 1.0kb upstream 1.0kb upstream 3879   true Lsat_1_v8_lg_9: 157866246-157870124 Lactuca sativa
Lsat_1_v5_gn_9_99500 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 157869125-157870124 Lactuca sativa
Lsat_1_v5_gn_9_99500 1.0kb downstream 1.0kb downstream 3879   true Lsat_1_v8_lg_9: 157865246-157869124 Lactuca sativa
Lsat_1_v5_gn_9_99500 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 157865246-157866245 Lactuca sativa
Lsat_1_v5_gn_9_99500 2.0kb upstream 2.0kb upstream 4879   true Lsat_1_v8_lg_9: 157866246-157871124 Lactuca sativa
Lsat_1_v5_gn_9_99500 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 157869125-157871124 Lactuca sativa
Lsat_1_v5_gn_9_99500 2.0kb downstream 2.0kb downstream 4879   true Lsat_1_v8_lg_9: 157864246-157869124 Lactuca sativa
Lsat_1_v5_gn_9_99500 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 157864246-157866245 Lactuca sativa
Lsat_1_v5_gn_9_99500 5.0kb upstream 5.0kb upstream 7879   true Lsat_1_v8_lg_9: 157866246-157874124 Lactuca sativa
Lsat_1_v5_gn_9_99500 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 157869125-157874124 Lactuca sativa
Lsat_1_v5_gn_9_99500 5.0kb downstream 5.0kb downstream 7879   true Lsat_1_v8_lg_9: 157861246-157869124 Lactuca sativa
Lsat_1_v5_gn_9_99500 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 157861246-157866245 Lactuca sativa
Lsat_1_v5_gn_9_99500 10.0kb upstream 10.0kb upstream 12879   true Lsat_1_v8_lg_9: 157866246-157879124 Lactuca sativa
Lsat_1_v5_gn_9_99500 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 157869125-157879124 Lactuca sativa
Lsat_1_v5_gn_9_99500 10.0kb downstream 10.0kb downstream 12879   true Lsat_1_v8_lg_9: 157856246-157869124 Lactuca sativa
Lsat_1_v5_gn_9_99500 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 157856246-157866245 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468755 5263 Asterids View MSA
123739735 5271 Pentapetalae View MSA
122788199 5272 Eudicot View MSA
122047245 5273 Angiosperm View MSA
121350648 5274 Embryophyte View MSA
123428584 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain