Gene : Lsat_1_v5_gn_9_80800 L. sativa V8

Defline:  (1 of 219) PF00847 - AP2 domain (AP2) Genomic Order:  2469
Name:  ? Lsat_1_v5_gn_9_80800 Secondary Identifier:  ? PAC:38927664

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_80800 0.5kb upstream 0.5kb upstream 3232   true Lsat_1_v8_lg_9: 113579174-113582405 Lactuca sativa
Lsat_1_v5_gn_9_80800 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 113579174-113579673 Lactuca sativa
Lsat_1_v5_gn_9_80800 0.5kb downstream 0.5kb downstream 3232   true Lsat_1_v8_lg_9: 113579674-113582905 Lactuca sativa
Lsat_1_v5_gn_9_80800 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 113582406-113582905 Lactuca sativa
Lsat_1_v5_gn_9_80800 1.0kb upstream 1.0kb upstream 3732   true Lsat_1_v8_lg_9: 113578674-113582405 Lactuca sativa
Lsat_1_v5_gn_9_80800 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 113578674-113579673 Lactuca sativa
Lsat_1_v5_gn_9_80800 1.0kb downstream 1.0kb downstream 3732   true Lsat_1_v8_lg_9: 113579674-113583405 Lactuca sativa
Lsat_1_v5_gn_9_80800 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 113582406-113583405 Lactuca sativa
Lsat_1_v5_gn_9_80800 2.0kb upstream 2.0kb upstream 4732   true Lsat_1_v8_lg_9: 113577674-113582405 Lactuca sativa
Lsat_1_v5_gn_9_80800 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 113577674-113579673 Lactuca sativa
Lsat_1_v5_gn_9_80800 2.0kb downstream 2.0kb downstream 4732   true Lsat_1_v8_lg_9: 113579674-113584405 Lactuca sativa
Lsat_1_v5_gn_9_80800 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 113582406-113584405 Lactuca sativa
Lsat_1_v5_gn_9_80800 5.0kb upstream 5.0kb upstream 7732   true Lsat_1_v8_lg_9: 113574674-113582405 Lactuca sativa
Lsat_1_v5_gn_9_80800 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 113574674-113579673 Lactuca sativa
Lsat_1_v5_gn_9_80800 5.0kb downstream 5.0kb downstream 7732   true Lsat_1_v8_lg_9: 113579674-113587405 Lactuca sativa
Lsat_1_v5_gn_9_80800 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 113582406-113587405 Lactuca sativa
Lsat_1_v5_gn_9_80800 10.0kb upstream 10.0kb upstream 12732   true Lsat_1_v8_lg_9: 113569674-113582405 Lactuca sativa
Lsat_1_v5_gn_9_80800 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 113569674-113579673 Lactuca sativa
Lsat_1_v5_gn_9_80800 10.0kb downstream 10.0kb downstream 12732   true Lsat_1_v8_lg_9: 113579674-113592405 Lactuca sativa
Lsat_1_v5_gn_9_80800 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 113582406-113592405 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470850 5263 Asterids View MSA
123749531 5271 Pentapetalae View MSA
122794764 5272 Eudicot View MSA
122048323 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121349804 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain