Gene : Lsat_1_v5_gn_9_8321 L. sativa V8
Defline:  (1 of 1) PTHR23315//PTHR23315:SF119 - BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING // U-BOX DOMAIN-CONTAINING PROTEIN 3 Genomic Order:  328
Name:  ? Lsat_1_v5_gn_9_8321 Secondary Identifier:  ? PAC:38924140
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-7511 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_8321 0.5kb upstream 0.5kb upstream 7887   true Lsat_1_v8_lg_9: 12065325-12073211 Lactuca sativa
Lsat_1_v5_gn_9_8321 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 12065325-12065824 Lactuca sativa
Lsat_1_v5_gn_9_8321 0.5kb downstream 0.5kb downstream 7887   true Lsat_1_v8_lg_9: 12065825-12073711 Lactuca sativa
Lsat_1_v5_gn_9_8321 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 12073212-12073711 Lactuca sativa
Lsat_1_v5_gn_9_8321 1.0kb upstream 1.0kb upstream 8387   true Lsat_1_v8_lg_9: 12064825-12073211 Lactuca sativa
Lsat_1_v5_gn_9_8321 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 12064825-12065824 Lactuca sativa
Lsat_1_v5_gn_9_8321 1.0kb downstream 1.0kb downstream 8387   true Lsat_1_v8_lg_9: 12065825-12074211 Lactuca sativa
Lsat_1_v5_gn_9_8321 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 12073212-12074211 Lactuca sativa
Lsat_1_v5_gn_9_8321 2.0kb upstream 2.0kb upstream 9387   true Lsat_1_v8_lg_9: 12063825-12073211 Lactuca sativa
Lsat_1_v5_gn_9_8321 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 12063825-12065824 Lactuca sativa
Lsat_1_v5_gn_9_8321 2.0kb downstream 2.0kb downstream 9387   true Lsat_1_v8_lg_9: 12065825-12075211 Lactuca sativa
Lsat_1_v5_gn_9_8321 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 12073212-12075211 Lactuca sativa
Lsat_1_v5_gn_9_8321 5.0kb upstream 5.0kb upstream 12387   true Lsat_1_v8_lg_9: 12060825-12073211 Lactuca sativa
Lsat_1_v5_gn_9_8321 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 12060825-12065824 Lactuca sativa
Lsat_1_v5_gn_9_8321 5.0kb downstream 5.0kb downstream 12387   true Lsat_1_v8_lg_9: 12065825-12078211 Lactuca sativa
Lsat_1_v5_gn_9_8321 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 12073212-12078211 Lactuca sativa
Lsat_1_v5_gn_9_8321 10.0kb upstream 10.0kb upstream 17387   true Lsat_1_v8_lg_9: 12055825-12073211 Lactuca sativa
Lsat_1_v5_gn_9_8321 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 12055825-12065824 Lactuca sativa
Lsat_1_v5_gn_9_8321 10.0kb downstream 10.0kb downstream 17387   true Lsat_1_v8_lg_9: 12065825-12083211 Lactuca sativa
Lsat_1_v5_gn_9_8321 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 12073212-12083211 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470289 5263 Asterids View MSA
123748124 5271 Pentapetalae View MSA
122789337 5272 Eudicot View MSA
122048814 5273 Angiosperm View MSA
121345933 5274 Embryophyte View MSA
123428864 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain