Gene : Lsat_1_v5_gn_9_86541 L. sativa V8
Defline:  (1 of 7) K15718 - linoleate 9S-lipoxygenase (LOX1_5) Genomic Order:  2679
Name:  ? Lsat_1_v5_gn_9_86541 Secondary Identifier:  ? PAC:38922551
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-5409 Lactuca sativa pathologic  
Lsativa PWY-5410 Lactuca sativa pathologic  
Lsativa PWY-735 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_86541 0.5kb upstream 0.5kb upstream 4014   true Lsat_1_v8_lg_9: 133966708-133970721 Lactuca sativa
Lsat_1_v5_gn_9_86541 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 133966708-133967207 Lactuca sativa
Lsat_1_v5_gn_9_86541 0.5kb downstream 0.5kb downstream 4014   true Lsat_1_v8_lg_9: 133967208-133971221 Lactuca sativa
Lsat_1_v5_gn_9_86541 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 133970722-133971221 Lactuca sativa
Lsat_1_v5_gn_9_86541 1.0kb upstream 1.0kb upstream 4514   true Lsat_1_v8_lg_9: 133966208-133970721 Lactuca sativa
Lsat_1_v5_gn_9_86541 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 133966208-133967207 Lactuca sativa
Lsat_1_v5_gn_9_86541 1.0kb downstream 1.0kb downstream 4514   true Lsat_1_v8_lg_9: 133967208-133971721 Lactuca sativa
Lsat_1_v5_gn_9_86541 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 133970722-133971721 Lactuca sativa
Lsat_1_v5_gn_9_86541 2.0kb upstream 2.0kb upstream 5514   true Lsat_1_v8_lg_9: 133965208-133970721 Lactuca sativa
Lsat_1_v5_gn_9_86541 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 133965208-133967207 Lactuca sativa
Lsat_1_v5_gn_9_86541 2.0kb downstream 2.0kb downstream 5514   true Lsat_1_v8_lg_9: 133967208-133972721 Lactuca sativa
Lsat_1_v5_gn_9_86541 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 133970722-133972721 Lactuca sativa
Lsat_1_v5_gn_9_86541 5.0kb upstream 5.0kb upstream 8514   true Lsat_1_v8_lg_9: 133962208-133970721 Lactuca sativa
Lsat_1_v5_gn_9_86541 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 133962208-133967207 Lactuca sativa
Lsat_1_v5_gn_9_86541 5.0kb downstream 5.0kb downstream 8514   true Lsat_1_v8_lg_9: 133967208-133975721 Lactuca sativa
Lsat_1_v5_gn_9_86541 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 133970722-133975721 Lactuca sativa
Lsat_1_v5_gn_9_86541 10.0kb upstream 10.0kb upstream 13514   true Lsat_1_v8_lg_9: 133957208-133970721 Lactuca sativa
Lsat_1_v5_gn_9_86541 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 133957208-133967207 Lactuca sativa
Lsat_1_v5_gn_9_86541 10.0kb downstream 10.0kb downstream 13514   true Lsat_1_v8_lg_9: 133967208-133980721 Lactuca sativa
Lsat_1_v5_gn_9_86541 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 133970722-133980721 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122793975 5272 Eudicot View MSA
121479154 5263 Asterids View MSA
123743828 5271 Pentapetalae View MSA
122049504 5273 Angiosperm View MSA
123429188 5275 Viridiplantae View MSA
121351701 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain