Gene : Lsat_1_v5_gn_9_88501 L. sativa V8
Defline:  (1 of 2) PF00022//PF00646 - Actin (Actin) // F-box domain (F-box) Genomic Order:  2747
Name:  ? Lsat_1_v5_gn_9_88501 Secondary Identifier:  ? PAC:38921551
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_88501 0.5kb upstream 0.5kb upstream 4050   true Lsat_1_v8_lg_9: 138369459-138373508 Lactuca sativa
Lsat_1_v5_gn_9_88501 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 138369459-138369958 Lactuca sativa
Lsat_1_v5_gn_9_88501 0.5kb downstream 0.5kb downstream 4050   true Lsat_1_v8_lg_9: 138369959-138374008 Lactuca sativa
Lsat_1_v5_gn_9_88501 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 138373509-138374008 Lactuca sativa
Lsat_1_v5_gn_9_88501 1.0kb upstream 1.0kb upstream 4550   true Lsat_1_v8_lg_9: 138368959-138373508 Lactuca sativa
Lsat_1_v5_gn_9_88501 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 138368959-138369958 Lactuca sativa
Lsat_1_v5_gn_9_88501 1.0kb downstream 1.0kb downstream 4550   true Lsat_1_v8_lg_9: 138369959-138374508 Lactuca sativa
Lsat_1_v5_gn_9_88501 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 138373509-138374508 Lactuca sativa
Lsat_1_v5_gn_9_88501 2.0kb upstream 2.0kb upstream 5550   true Lsat_1_v8_lg_9: 138367959-138373508 Lactuca sativa
Lsat_1_v5_gn_9_88501 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 138367959-138369958 Lactuca sativa
Lsat_1_v5_gn_9_88501 2.0kb downstream 2.0kb downstream 5550   true Lsat_1_v8_lg_9: 138369959-138375508 Lactuca sativa
Lsat_1_v5_gn_9_88501 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 138373509-138375508 Lactuca sativa
Lsat_1_v5_gn_9_88501 5.0kb upstream 5.0kb upstream 8550   true Lsat_1_v8_lg_9: 138364959-138373508 Lactuca sativa
Lsat_1_v5_gn_9_88501 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 138364959-138369958 Lactuca sativa
Lsat_1_v5_gn_9_88501 5.0kb downstream 5.0kb downstream 8550   true Lsat_1_v8_lg_9: 138369959-138378508 Lactuca sativa
Lsat_1_v5_gn_9_88501 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 138373509-138378508 Lactuca sativa
Lsat_1_v5_gn_9_88501 10.0kb upstream 10.0kb upstream 13550   true Lsat_1_v8_lg_9: 138359959-138373508 Lactuca sativa
Lsat_1_v5_gn_9_88501 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 138359959-138369958 Lactuca sativa
Lsat_1_v5_gn_9_88501 10.0kb downstream 10.0kb downstream 13550   true Lsat_1_v8_lg_9: 138369959-138383508 Lactuca sativa
Lsat_1_v5_gn_9_88501 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 138373509-138383508 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466653 5263 Asterids View MSA
123744572 5271 Pentapetalae View MSA
122792613 5272 Eudicot View MSA
122045785 5273 Angiosperm View MSA
121310502 5274 Embryophyte View MSA
123347970 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain