Gene : Lsat_1_v5_gn_9_90121 L. sativa V8
Defline:  (1 of 1) PTHR12849//PTHR31490//PTHR31490:SF2 - RNA LARIAT DEBRANCHING ENZYME // FAMILY NOT NAMED // GLYCOSYL HYDROLASE FAMILY 10 PROTEIN Genomic Order:  2794
Name:  ? Lsat_1_v5_gn_9_90121 Secondary Identifier:  ? PAC:38922060
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_90121 0.5kb upstream 0.5kb upstream 10616   true Lsat_1_v8_lg_9: 140367750-140378365 Lactuca sativa
Lsat_1_v5_gn_9_90121 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 140367750-140368249 Lactuca sativa
Lsat_1_v5_gn_9_90121 0.5kb downstream 0.5kb downstream 10616   true Lsat_1_v8_lg_9: 140368250-140378865 Lactuca sativa
Lsat_1_v5_gn_9_90121 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 140378366-140378865 Lactuca sativa
Lsat_1_v5_gn_9_90121 1.0kb upstream 1.0kb upstream 11116   true Lsat_1_v8_lg_9: 140367250-140378365 Lactuca sativa
Lsat_1_v5_gn_9_90121 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 140367250-140368249 Lactuca sativa
Lsat_1_v5_gn_9_90121 1.0kb downstream 1.0kb downstream 11116   true Lsat_1_v8_lg_9: 140368250-140379365 Lactuca sativa
Lsat_1_v5_gn_9_90121 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 140378366-140379365 Lactuca sativa
Lsat_1_v5_gn_9_90121 2.0kb upstream 2.0kb upstream 12116   true Lsat_1_v8_lg_9: 140366250-140378365 Lactuca sativa
Lsat_1_v5_gn_9_90121 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 140366250-140368249 Lactuca sativa
Lsat_1_v5_gn_9_90121 2.0kb downstream 2.0kb downstream 12116   true Lsat_1_v8_lg_9: 140368250-140380365 Lactuca sativa
Lsat_1_v5_gn_9_90121 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 140378366-140380365 Lactuca sativa
Lsat_1_v5_gn_9_90121 5.0kb upstream 5.0kb upstream 15116   true Lsat_1_v8_lg_9: 140363250-140378365 Lactuca sativa
Lsat_1_v5_gn_9_90121 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 140363250-140368249 Lactuca sativa
Lsat_1_v5_gn_9_90121 5.0kb downstream 5.0kb downstream 15116   true Lsat_1_v8_lg_9: 140368250-140383365 Lactuca sativa
Lsat_1_v5_gn_9_90121 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 140378366-140383365 Lactuca sativa
Lsat_1_v5_gn_9_90121 10.0kb upstream 10.0kb upstream 20116   true Lsat_1_v8_lg_9: 140358250-140378365 Lactuca sativa
Lsat_1_v5_gn_9_90121 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 140358250-140368249 Lactuca sativa
Lsat_1_v5_gn_9_90121 10.0kb downstream 10.0kb downstream 20116   true Lsat_1_v8_lg_9: 140368250-140388365 Lactuca sativa
Lsat_1_v5_gn_9_90121 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 140378366-140388365 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473686 5263 Asterids View MSA
123751912 5271 Pentapetalae View MSA
122790761 5272 Eudicot View MSA
122050145 5273 Angiosperm View MSA
121311762 5274 Embryophyte View MSA
123426707 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain