Gene : Lsat_1_v5_gn_9_901 L. sativa V8
Defline:  (1 of 1) K00949 - thiamine pyrophosphokinase (thiN, TPK1, THI80) Genomic Order:  176
Name:  ? Lsat_1_v5_gn_9_901 Secondary Identifier:  ? PAC:38926955
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Lsativa PWY-6908 Lactuca sativa pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_901 0.5kb upstream 0.5kb upstream 2598   true Lsat_1_v8_lg_9: 5689538-5692135 Lactuca sativa
Lsat_1_v5_gn_9_901 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 5689538-5690037 Lactuca sativa
Lsat_1_v5_gn_9_901 0.5kb downstream 0.5kb downstream 2598   true Lsat_1_v8_lg_9: 5690038-5692635 Lactuca sativa
Lsat_1_v5_gn_9_901 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 5692136-5692635 Lactuca sativa
Lsat_1_v5_gn_9_901 1.0kb upstream 1.0kb upstream 3098   true Lsat_1_v8_lg_9: 5689038-5692135 Lactuca sativa
Lsat_1_v5_gn_9_901 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 5689038-5690037 Lactuca sativa
Lsat_1_v5_gn_9_901 1.0kb downstream 1.0kb downstream 3098   true Lsat_1_v8_lg_9: 5690038-5693135 Lactuca sativa
Lsat_1_v5_gn_9_901 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 5692136-5693135 Lactuca sativa
Lsat_1_v5_gn_9_901 2.0kb upstream 2.0kb upstream 4098   true Lsat_1_v8_lg_9: 5688038-5692135 Lactuca sativa
Lsat_1_v5_gn_9_901 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 5688038-5690037 Lactuca sativa
Lsat_1_v5_gn_9_901 2.0kb downstream 2.0kb downstream 4098   true Lsat_1_v8_lg_9: 5690038-5694135 Lactuca sativa
Lsat_1_v5_gn_9_901 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 5692136-5694135 Lactuca sativa
Lsat_1_v5_gn_9_901 5.0kb upstream 5.0kb upstream 7098   true Lsat_1_v8_lg_9: 5685038-5692135 Lactuca sativa
Lsat_1_v5_gn_9_901 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 5685038-5690037 Lactuca sativa
Lsat_1_v5_gn_9_901 5.0kb downstream 5.0kb downstream 7098   true Lsat_1_v8_lg_9: 5690038-5697135 Lactuca sativa
Lsat_1_v5_gn_9_901 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 5692136-5697135 Lactuca sativa
Lsat_1_v5_gn_9_901 10.0kb upstream 10.0kb upstream 12098   true Lsat_1_v8_lg_9: 5680038-5692135 Lactuca sativa
Lsat_1_v5_gn_9_901 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 5680038-5690037 Lactuca sativa
Lsat_1_v5_gn_9_901 10.0kb downstream 10.0kb downstream 12098   true Lsat_1_v8_lg_9: 5690038-5702135 Lactuca sativa
Lsat_1_v5_gn_9_901 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 5692136-5702135 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121480239 5263 Asterids View MSA
123740086 5271 Pentapetalae View MSA
122769969 5272 Eudicot View MSA
122046316 5273 Angiosperm View MSA
121345006 5274 Embryophyte View MSA
123424730 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain