Gene : Lsat_1_v5_gn_9_90520 L. sativa V8
Defline:  (1 of 1) K08741 - DNA mismatch repair protein MSH5 (MSH5) Genomic Order:  2807
Name:  ? Lsat_1_v5_gn_9_90520 Secondary Identifier:  ? PAC:38926312
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_90520 0.5kb upstream 0.5kb upstream 7960   true Lsat_1_v8_lg_9: 141054904-141062863 Lactuca sativa
Lsat_1_v5_gn_9_90520 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 141054904-141055403 Lactuca sativa
Lsat_1_v5_gn_9_90520 0.5kb downstream 0.5kb downstream 7960   true Lsat_1_v8_lg_9: 141055404-141063363 Lactuca sativa
Lsat_1_v5_gn_9_90520 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 141062864-141063363 Lactuca sativa
Lsat_1_v5_gn_9_90520 1.0kb upstream 1.0kb upstream 8460   true Lsat_1_v8_lg_9: 141054404-141062863 Lactuca sativa
Lsat_1_v5_gn_9_90520 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 141054404-141055403 Lactuca sativa
Lsat_1_v5_gn_9_90520 1.0kb downstream 1.0kb downstream 8460   true Lsat_1_v8_lg_9: 141055404-141063863 Lactuca sativa
Lsat_1_v5_gn_9_90520 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 141062864-141063863 Lactuca sativa
Lsat_1_v5_gn_9_90520 2.0kb upstream 2.0kb upstream 9460   true Lsat_1_v8_lg_9: 141053404-141062863 Lactuca sativa
Lsat_1_v5_gn_9_90520 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 141053404-141055403 Lactuca sativa
Lsat_1_v5_gn_9_90520 2.0kb downstream 2.0kb downstream 9460   true Lsat_1_v8_lg_9: 141055404-141064863 Lactuca sativa
Lsat_1_v5_gn_9_90520 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 141062864-141064863 Lactuca sativa
Lsat_1_v5_gn_9_90520 5.0kb upstream 5.0kb upstream 12460   true Lsat_1_v8_lg_9: 141050404-141062863 Lactuca sativa
Lsat_1_v5_gn_9_90520 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 141050404-141055403 Lactuca sativa
Lsat_1_v5_gn_9_90520 5.0kb downstream 5.0kb downstream 12460   true Lsat_1_v8_lg_9: 141055404-141067863 Lactuca sativa
Lsat_1_v5_gn_9_90520 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 141062864-141067863 Lactuca sativa
Lsat_1_v5_gn_9_90520 10.0kb upstream 10.0kb upstream 17460   true Lsat_1_v8_lg_9: 141045404-141062863 Lactuca sativa
Lsat_1_v5_gn_9_90520 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 141045404-141055403 Lactuca sativa
Lsat_1_v5_gn_9_90520 10.0kb downstream 10.0kb downstream 17460   true Lsat_1_v8_lg_9: 141055404-141072863 Lactuca sativa
Lsat_1_v5_gn_9_90520 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 141062864-141072863 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470599 5263 Asterids View MSA
123749181 5271 Pentapetalae View MSA
122792549 5272 Eudicot View MSA
122042085 5273 Angiosperm View MSA
121347991 5274 Embryophyte View MSA
123423769 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain