Gene : Lsat_1_v5_gn_9_90660 L. sativa V8
Defline:  (1 of 1) PTHR30560//PTHR30560:SF3 - TRIGGER FACTOR CHAPERONE AND PEPTIDYL-PROLYL CIS/TRANS ISOMERASE // TRIGGER FACTOR-LIKE PROTEIN TIG Genomic Order:  2853
Name:  ? Lsat_1_v5_gn_9_90660 Secondary Identifier:  ? PAC:38923831
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Lsat_1_v5_gn_9_90660 0.5kb upstream 0.5kb upstream 3767   true Lsat_1_v8_lg_9: 143409570-143413336 Lactuca sativa
Lsat_1_v5_gn_9_90660 0.5kb upstream 0.5kb upstream 500   false Lsat_1_v8_lg_9: 143412837-143413336 Lactuca sativa
Lsat_1_v5_gn_9_90660 0.5kb downstream 0.5kb downstream 3767   true Lsat_1_v8_lg_9: 143409070-143412836 Lactuca sativa
Lsat_1_v5_gn_9_90660 0.5kb downstream 0.5kb downstream 500   false Lsat_1_v8_lg_9: 143409070-143409569 Lactuca sativa
Lsat_1_v5_gn_9_90660 1.0kb upstream 1.0kb upstream 4267   true Lsat_1_v8_lg_9: 143409570-143413836 Lactuca sativa
Lsat_1_v5_gn_9_90660 1.0kb upstream 1.0kb upstream 1000   false Lsat_1_v8_lg_9: 143412837-143413836 Lactuca sativa
Lsat_1_v5_gn_9_90660 1.0kb downstream 1.0kb downstream 4267   true Lsat_1_v8_lg_9: 143408570-143412836 Lactuca sativa
Lsat_1_v5_gn_9_90660 1.0kb downstream 1.0kb downstream 1000   false Lsat_1_v8_lg_9: 143408570-143409569 Lactuca sativa
Lsat_1_v5_gn_9_90660 2.0kb upstream 2.0kb upstream 5267   true Lsat_1_v8_lg_9: 143409570-143414836 Lactuca sativa
Lsat_1_v5_gn_9_90660 2.0kb upstream 2.0kb upstream 2000   false Lsat_1_v8_lg_9: 143412837-143414836 Lactuca sativa
Lsat_1_v5_gn_9_90660 2.0kb downstream 2.0kb downstream 5267   true Lsat_1_v8_lg_9: 143407570-143412836 Lactuca sativa
Lsat_1_v5_gn_9_90660 2.0kb downstream 2.0kb downstream 2000   false Lsat_1_v8_lg_9: 143407570-143409569 Lactuca sativa
Lsat_1_v5_gn_9_90660 5.0kb upstream 5.0kb upstream 8267   true Lsat_1_v8_lg_9: 143409570-143417836 Lactuca sativa
Lsat_1_v5_gn_9_90660 5.0kb upstream 5.0kb upstream 5000   false Lsat_1_v8_lg_9: 143412837-143417836 Lactuca sativa
Lsat_1_v5_gn_9_90660 5.0kb downstream 5.0kb downstream 8267   true Lsat_1_v8_lg_9: 143404570-143412836 Lactuca sativa
Lsat_1_v5_gn_9_90660 5.0kb downstream 5.0kb downstream 5000   false Lsat_1_v8_lg_9: 143404570-143409569 Lactuca sativa
Lsat_1_v5_gn_9_90660 10.0kb upstream 10.0kb upstream 13267   true Lsat_1_v8_lg_9: 143409570-143422836 Lactuca sativa
Lsat_1_v5_gn_9_90660 10.0kb upstream 10.0kb upstream 10000   false Lsat_1_v8_lg_9: 143412837-143422836 Lactuca sativa
Lsat_1_v5_gn_9_90660 10.0kb downstream 10.0kb downstream 13267   true Lsat_1_v8_lg_9: 143399570-143412836 Lactuca sativa
Lsat_1_v5_gn_9_90660 10.0kb downstream 10.0kb downstream 10000   false Lsat_1_v8_lg_9: 143399570-143409569 Lactuca sativa

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468440 5263 Asterids View MSA
123738103 5271 Pentapetalae View MSA
122786628 5272 Eudicot View MSA
122042238 5273 Angiosperm View MSA
121345514 5274 Embryophyte View MSA
123423774 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain