Protein Domain : IPR007928

Type:  Family Name:  Choristoneura fumiferana antifreeze
Description:  Antifreeze proteins (AFPs) are a class of proteins that are able to bind to and inhibit the growth of macromolecular ice, thereby permitting an organism to survive subzero temperatures by decreasing the probability of ice nucleation in their bodies []. These proteins have been characterised from a variety of organisms, including fish, plants, bacteria, fungi and arthropods. This entry represents insect AFPs of the type found in spruce budworm, Choristoneura fumiferana.The structure of these AFPs consists of a left-handed beta-helix with 15 residues per coil []. The beta-helices of insect AFPs present a highly rigid array of threonine residues and bound water molecules that can effectively mimic the ice lattice. As such, beta-helical AFPs provide a more effective coverage of the ice surface compared to the alpha-helical fish AFPs.A second insect antifreeze from Tenebrio molitor() also consists of beta-helices, however in these proteins the helices form a right-handed twist; these proteins show no sequence homology to the current entry, but may act by a similar mechanism. The beta-helix motif may be used as an AFP structural motif in non-homologous proteins from other (non-fish) organisms as well. Short Name:  Antifreeze_CF

0 Child Features

0 Contains

2 Cross Referencess

Identifier
PF05264
SSF51177

0 Found In

0 GO Annotation

0 Ontology Annotations

0 Parent Features

24 Proteins

DB identifier UniProt Accession Secondary Identifier Organism Name Length
Migut.D01487.1.p A0A022REI0 PAC:28929438 Mimulus guttatus 278  
Migut.H00484.1.p PAC:28950818 Mimulus guttatus 707  
Anaoc.0002s1712.1.p PAC:37515491 Anacardium occidentale 307  
Anaoc.0002s1712.2.p PAC:37515492 Anacardium occidentale 280  
Pum0051s0014.1.p A0A1X6PHY4 PAC:38010836 Porphyra umbilicalis 59  
Gohir.D05G148900.1.p PAC:38109241 Gossypium hirsutum 51  
Isati.16593s0001.1.p PAC:39364023 Isatis tinctoria 95  
Lesat.0059s0315.1.p PAC:39499488 Lepidium sativum 152  
Ca_21921 PAC:40143408 Cicer arietinum 124  
HanXRQChr01g0012631 A0A251VMT6 PAC:40324310 Helianthus annuus 122  
evm.model.AsparagusV1_05.1599 A0A5P1EUG0 PAC:40525175 Asparagus officinalis 200  
MgTOL.D1367.1.p PAC:40969849 Mimulus guttatus TOL 278  
MgTOL.H0537.1.p PAC:40966584 Mimulus guttatus TOL 707  
MgNONTOL.D1411.1.p PAC:41016903 Mimulus guttatus NONTOL 278  
MgNONTOL.H0536.1.p PAC:41008574 Mimulus guttatus NONTOL 707  
Gotom.D05G160800.1.p A0A5D2KWK7 PAC:42189790 Gossypium tomentosum 51  
CKAN_01834200 PAC:42689245 Cinnamomum kanehirae 384  
EL10Ac8g20168.1 PAC:43401775 Beta vulgaris 247  
MgTOL.D1367.1.p PAC:43513683 Mimulus guttatus TOL 278  
MgTOL.H0537.1.p PAC:43511477 Mimulus guttatus TOL 707  
MgNONTOL.D1411.1.p PAC:43592585 Mimulus guttatus NONTOL 278  
MgNONTOL.H0536.1.p PAC:43595030 Mimulus guttatus NONTOL 707  
Brame.05PG132300.1.p PAC:45255598 Brachypodium mexicanum 125  
Brame.05PG359800.1.p PAC:45257319 Brachypodium mexicanum 116  

2 Publications

First Author Title Year Journal Volume Pages PubMed ID
            15291806
            12015145