Protein Family : RNA-binding (RRM/RBD/RNP motifs) family protein 123749009

Method ID:  5271 Method Name:  Pentapetalae
Sequence Alignment:  View MSA Member Count:  107

107 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29751.t000013 (1 of 1) PTHR15241//PTHR15241:SF4 - TRANSFORMER-2-RELATED // TRANSFORMER-SR RIBONUCLEOPROTEIN-RELATED R. communis v0.1 2703   29751: 56319-59021
29784.t000016 (1 of 2) K12897 - transformer-2 protein (TRA2) R. communis v0.1 2438   29784: 141909-144346
30190.t000484 (1 of 2) K12897 - transformer-2 protein (TRA2) R. communis v0.1 4466   30190: 2796459-2800924
Cucsa.043980 (1 of 2) PTHR15241 - TRANSFORMER-2-RELATED C. sativus v1.0 4360   scaffold00542: 574873-579232
Cucsa.146830 (1 of 1) PTHR15241:SF4 - TRANSFORMER-SR RIBONUCLEOPROTEIN-RELATED C. sativus v1.0 3234   scaffold01100: 170478-173711
orange1.1g026421m.g (1 of 3) PTHR15241 - TRANSFORMER-2-RELATED C. sinensis v1.1 3283   scaffold00017: 1256879-1260161
orange1.1g016540m.g (1 of 1) PTHR15241:SF4 - TRANSFORMER-SR RIBONUCLEOPROTEIN-RELATED C. sinensis v1.1 2991   scaffold00026: 388176-391166
AT4G35785 (1 of 1) K12897 - transformer-2 protein (TRA2) A. thaliana TAIR10 2315   Chr4: 16952963-16955277
AT1G07350 (1 of 1) PTHR15241//PTHR15241:SF4 - TRANSFORMER-2-RELATED // TRANSFORMER-SR RIBONUCLEOPROTEIN-RELATED A. thaliana TAIR10 2677   Chr1: 2257425-2260101
Thhalv10026015m.g (1 of 3) PTHR15241 - TRANSFORMER-2-RELATED E. salsugineum v1.0 2334   scaffold_1: 1804562-1806895
Thhalv10022831m.g (1 of 3) PTHR15241 - TRANSFORMER-2-RELATED E. salsugineum v1.0 2210   scaffold_11: 1441264-1443473
Thhalv10008061m.g (1 of 3) PTHR15241 - TRANSFORMER-2-RELATED E. salsugineum v1.0 2525   scaffold_5: 13325519-13328043
Ciclev10028652m.g (1 of 1) PTHR15241:SF4 - TRANSFORMER-SR RIBONUCLEOPROTEIN-RELATED C. clementina v1.0 2974   scaffold_8: 24198803-24201776
Ciclev10026375m.g (1 of 3) PTHR15241 - TRANSFORMER-2-RELATED C. clementina v1.0 3385   scaffold_7: 494527-497911
Lus10017507.g (1 of 7) PTHR15241 - TRANSFORMER-2-RELATED L. usitatissimum v1.0 1659   scaffold1253: 304821-306479
Lus10040705.g (1 of 2) PTHR15241:SF4 - TRANSFORMER-SR RIBONUCLEOPROTEIN-RELATED L. usitatissimum v1.0 1715   scaffold156: 1100124-1101838
Lus10041854.g (1 of 2) KOG0107//KOG4207 - Alternative splicing factor SRp20/9G8 (RRM superfamily) // Predicted splicing factor, SR protein superfamily L. usitatissimum v1.0 1684   scaffold272: 2050041-2051724
Lus10028400.g (1 of 7) PTHR15241 - TRANSFORMER-2-RELATED L. usitatissimum v1.0 1423   scaffold413: 468338-469760
Lus10028776.g (1 of 7) PTHR15241 - TRANSFORMER-2-RELATED L. usitatissimum v1.0 1697   scaffold540: 199676-201372
Gorai.003G005400 (1 of 4) PTHR15241 - TRANSFORMER-2-RELATED G. raimondii v2.1 2913   Chr03: 298398-301310
Gorai.003G125000 (1 of 3) PTHR15241:SF4 - TRANSFORMER-SR RIBONUCLEOPROTEIN-RELATED G. raimondii v2.1 3049   Chr03: 37261340-37264388
Gorai.013G261000 (1 of 3) PTHR15241:SF4 - TRANSFORMER-SR RIBONUCLEOPROTEIN-RELATED G. raimondii v2.1 3373   Chr13: 57543405-57546777
Gorai.008G248300 (1 of 1) KOG0107//KOG0121 - Alternative splicing factor SRp20/9G8 (RRM superfamily) // Nuclear cap-binding protein complex, subunit CBP20 (RRM superfamily) G. raimondii v2.1 4029   Chr08: 53235167-53239195
Thecc1EG016294 (1 of 2) K12897 - transformer-2 protein (TRA2) T. cacao v1.1 2863   scaffold_3: 32239503-32242365
Thecc1EG041684 (1 of 2) PTHR15241//PTHR15241:SF4 - TRANSFORMER-2-RELATED // TRANSFORMER-SR RIBONUCLEOPROTEIN-RELATED T. cacao v1.1 3425   scaffold_9: 39076000-39079424
Migut.E01075 (1 of 4) PTHR15241 - TRANSFORMER-2-RELATED M. guttatus v2.0 3275   scaffold_5: 13374814-13378088
Migut.L00810 (1 of 4) PTHR15241 - TRANSFORMER-2-RELATED M. guttatus v2.0 3768   scaffold_12: 13042984-13046751
Migut.L00735 (1 of 4) PTHR15241 - TRANSFORMER-2-RELATED M. guttatus v2.0 4082   scaffold_12: 11362527-11366608
Migut.N00813 (1 of 1) PTHR15241:SF4 - TRANSFORMER-SR RIBONUCLEOPROTEIN-RELATED M. guttatus v2.0 3088   scaffold_14: 4940653-4943740
Araha.12053s0009 (1 of 2) PTHR15241 - TRANSFORMER-2-RELATED A. halleri v1.1 2426   Scaffold12053: 44889-47314

107 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
Cucsa.043980.1 C. sativus v1.0 123749009 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5271 Pentapetalae
orange1.1g016540m C. sinensis v1.1 123749009 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5271 Pentapetalae
Ciclev10026375m C. clementina v1.0 123749009 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5271 Pentapetalae
Ciclev10028652m C. clementina v1.0 123749009 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5271 Pentapetalae
Lus10041854 L. usitatissimum v1.0 123749009 RNA-binding (RRM/RBD/RNP motifs) family protein 5 5271 Pentapetalae
Lus10028776 L. usitatissimum v1.0 123749009 RNA-binding (RRM/RBD/RNP motifs) family protein 5 5271 Pentapetalae
Gorai.013G261000.1 G. raimondii v2.1 123749009 RNA-binding (RRM/RBD/RNP motifs) family protein 4 5271 Pentapetalae
Thecc1EG016294t1 T. cacao v1.1 123749009 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5271 Pentapetalae
Migut.N00813.1.p M. guttatus v2.0 123749009 RNA-binding (RRM/RBD/RNP motifs) family protein 4 5271 Pentapetalae
Glyma.01G162000.1.p G. max Wm82.a2.v1 123749009 RNA-binding (RRM/RBD/RNP motifs) family protein 6 5271 Pentapetalae
Glyma.18G067300.1.p G. max Wm82.a2.v1 123749009 RNA-binding (RRM/RBD/RNP motifs) family protein 6 5271 Pentapetalae
Brara.J00512.1.p B. rapa FPsc v1.3 123749009 RNA-binding (RRM/RBD/RNP motifs) family protein 3 5271 Pentapetalae
Eucgr.J02495.1.p E. grandis v2.0 123749009 RNA-binding (RRM/RBD/RNP motifs) family protein 3 5271 Pentapetalae
Eucgr.J01947.1.p E. grandis v2.0 123749009 RNA-binding (RRM/RBD/RNP motifs) family protein 3 5271 Pentapetalae
Prupe.7G175500.1.p P. persica v2.1 123749009 RNA-binding (RRM/RBD/RNP motifs) family protein 3 5271 Pentapetalae
Manes.01G060400.1.p M. esculenta v6.1 123749009 RNA-binding (RRM/RBD/RNP motifs) family protein 4 5271 Pentapetalae
Kalax.0767s0003.1.p K. laxiflora v1.1 123749009 RNA-binding (RRM/RBD/RNP motifs) family protein 4 5271 Pentapetalae
Kalax.0493s0027.1.p K. laxiflora v1.1 123749009 RNA-binding (RRM/RBD/RNP motifs) family protein 4 5271 Pentapetalae
Kalax.0136s0053.1.p K. laxiflora v1.1 123749009 RNA-binding (RRM/RBD/RNP motifs) family protein 4 5271 Pentapetalae
Kalax.0020s0033.1.p K. laxiflora v1.1 123749009 RNA-binding (RRM/RBD/RNP motifs) family protein 4 5271 Pentapetalae
Kaladp0053s0422.1.p K. fedtschenkoi v1.1 123749009 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5271 Pentapetalae
Kaladp0095s0831.1.p K. fedtschenkoi v1.1 123749009 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5271 Pentapetalae
Solyc02g061840.2.1 S. lycopersicum ITAG2.4 123749009 RNA-binding (RRM/RBD/RNP motifs) family protein 3 5271 Pentapetalae
Potri.003G130301.1.p P. trichocarpa v3.1 123749009 RNA-binding (RRM/RBD/RNP motifs) family protein 4 5271 Pentapetalae
Podel.01G259500.1.p P. deltoides WV94 v2.1 123749009 RNA-binding (RRM/RBD/RNP motifs) family protein 3 5271 Pentapetalae
PGSC0003DMP400015253 S. tuberosum v4.03 123749009 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5271 Pentapetalae
PGSC0003DMP400052822 S. tuberosum v4.03 123749009 RNA-binding (RRM/RBD/RNP motifs) family protein 2 5271 Pentapetalae
Oeu059319.1 O. europaea v1.0 123749009 RNA-binding (RRM/RBD/RNP motifs) family protein 3 5271 Pentapetalae
Oeu035012.2 O. europaea v1.0 123749009 RNA-binding (RRM/RBD/RNP motifs) family protein 3 5271 Pentapetalae
VIT_202s0025g00090.7 V. vinifera v2.1 123749009 RNA-binding (RRM/RBD/RNP motifs) family protein 3 5271 Pentapetalae