Protein Family : RING domain ligase2 124070395

Method ID:  5270 Method Name:  Rosid
Sequence Alignment:  View MSA Member Count:  108
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108 Genes

Primary Identifier Defline Organism Name Symbol Length Chromosome Location
29929.t000298 (1 of 2) PTHR10857:SF34 - COPINE (CALCIUM-DEPENDENT PHOSPHOLIPID-BINDING PROTEIN) FAMILY PROTEIN R. communis v0.1 3820   29929: 1700910-1704729
30147.t000110 (1 of 2) PTHR10857:SF28 - E3 UBIQUITIN-PROTEIN LIGASE RGLG1-RELATED R. communis v0.1 3259   30147: 2880508-2883766
29633.t000054 (1 of 2) PTHR10857:SF28 - E3 UBIQUITIN-PROTEIN LIGASE RGLG1-RELATED R. communis v0.1 3749   29633: 333506-337254
Cucsa.011120 (1 of 3) PTHR10857:SF28 - E3 UBIQUITIN-PROTEIN LIGASE RGLG1-RELATED C. sativus v1.0 5990   scaffold00154: 436737-442726
Cucsa.196380 (1 of 3) PTHR10857:SF28 - E3 UBIQUITIN-PROTEIN LIGASE RGLG1-RELATED C. sativus v1.0 3686   scaffold01357: 78302-81987
Cucsa.286760 (1 of 2) PTHR10857:SF34 - COPINE (CALCIUM-DEPENDENT PHOSPHOLIPID-BINDING PROTEIN) FAMILY PROTEIN C. sativus v1.0 3482   scaffold02653: 2740539-2744020
orange1.1g012303m.g (1 of 1) PTHR10857:SF34 - COPINE (CALCIUM-DEPENDENT PHOSPHOLIPID-BINDING PROTEIN) FAMILY PROTEIN C. sinensis v1.1 4291   scaffold00020: 380946-385236
orange1.1g015418m.g (1 of 2) PTHR10857:SF28 - E3 UBIQUITIN-PROTEIN LIGASE RGLG1-RELATED C. sinensis v1.1 5177   scaffold00252: 103591-108767
orange1.1g042752m.g (1 of 2) PTHR10857:SF28 - E3 UBIQUITIN-PROTEIN LIGASE RGLG1-RELATED C. sinensis v1.1 3587   scaffold00003: 1165415-1169001
AT5G14420 (1 of 2) PTHR10857:SF28 - E3 UBIQUITIN-PROTEIN LIGASE RGLG1-RELATED A. thaliana TAIR10 RGLG2 3199   Chr5: 4648111-4651309
AT3G01650 (1 of 2) PTHR10857:SF28 - E3 UBIQUITIN-PROTEIN LIGASE RGLG1-RELATED A. thaliana TAIR10 RGLG1 3258   Chr3: 242011-245268
AT1G67800 (1 of 1) PTHR10857:SF34 - COPINE (CALCIUM-DEPENDENT PHOSPHOLIPID-BINDING PROTEIN) FAMILY PROTEIN A. thaliana TAIR10 2952   Chr1: 25420780-25423731
Thhalv10020651m.g (1 of 2) PTHR10857:SF28 - E3 UBIQUITIN-PROTEIN LIGASE RGLG1-RELATED E. salsugineum v1.0 3168   scaffold_13: 9326377-9329544
Thhalv10013466m.g (1 of 2) PTHR10857:SF28 - E3 UBIQUITIN-PROTEIN LIGASE RGLG1-RELATED E. salsugineum v1.0 3217   scaffold_2: 4715506-4718722
Thhalv10019546m.g (1 of 2) PTHR10857:SF34 - COPINE (CALCIUM-DEPENDENT PHOSPHOLIPID-BINDING PROTEIN) FAMILY PROTEIN E. salsugineum v1.0 2253   scaffold_9: 6227433-6229685
Ciclev10020205m.g (1 of 2) PTHR10857:SF34 - COPINE (CALCIUM-DEPENDENT PHOSPHOLIPID-BINDING PROTEIN) FAMILY PROTEIN C. clementina v1.0 4273   scaffold_3: 3767475-3771747
Ciclev10015247m.g (1 of 1) PTHR10857:SF28 - E3 UBIQUITIN-PROTEIN LIGASE RGLG1-RELATED C. clementina v1.0 4970   scaffold_2: 10050552-10055521
Ciclev10031509m.g (1 of 2) PTHR10857:SF34 - COPINE (CALCIUM-DEPENDENT PHOSPHOLIPID-BINDING PROTEIN) FAMILY PROTEIN C. clementina v1.0 4817   scaffold_4: 22007451-22012267
Lus10022294.g (1 of 3) PF07002//PF13920 - Copine (Copine) // Zinc finger, C3HC4 type (RING finger) (zf-C3HC4_3) L. usitatissimum v1.0 2259   scaffold225: 584576-586834
Lus10033043.g (1 of 7) PTHR10857:SF28 - E3 UBIQUITIN-PROTEIN LIGASE RGLG1-RELATED L. usitatissimum v1.0 2706   scaffold306: 222065-224770
Lus10006463.g (1 of 4) PTHR10857:SF34 - COPINE (CALCIUM-DEPENDENT PHOSPHOLIPID-BINDING PROTEIN) FAMILY PROTEIN L. usitatissimum v1.0 2502   scaffold743: 216016-218517
Lus10011405.g (1 of 4) PTHR10857:SF34 - COPINE (CALCIUM-DEPENDENT PHOSPHOLIPID-BINDING PROTEIN) FAMILY PROTEIN L. usitatissimum v1.0 2563   scaffold744: 385626-388188
Gorai.012G065700 (1 of 4) PTHR10857:SF28 - E3 UBIQUITIN-PROTEIN LIGASE RGLG1-RELATED G. raimondii v2.1 4026   Chr12: 9290538-9294563
Gorai.008G202700 (1 of 2) PTHR10857:SF34 - COPINE (CALCIUM-DEPENDENT PHOSPHOLIPID-BINDING PROTEIN) FAMILY PROTEIN G. raimondii v2.1 4215   Chr08: 48839719-48843933
Gorai.009G335200 (1 of 4) PTHR10857:SF28 - E3 UBIQUITIN-PROTEIN LIGASE RGLG1-RELATED G. raimondii v2.1 6818   Chr09: 35505410-35512227
Gorai.006G034900 (1 of 4) PTHR10857:SF28 - E3 UBIQUITIN-PROTEIN LIGASE RGLG1-RELATED G. raimondii v2.1 3731   Chr06: 9247123-9250853
Thecc1EG010629 (1 of 2) PTHR10857:SF34 - COPINE (CALCIUM-DEPENDENT PHOSPHOLIPID-BINDING PROTEIN) FAMILY PROTEIN T. cacao v1.1 5810   scaffold_2: 34555070-34560879
Thecc1EG014506 (1 of 2) PTHR10857:SF34 - COPINE (CALCIUM-DEPENDENT PHOSPHOLIPID-BINDING PROTEIN) FAMILY PROTEIN T. cacao v1.1 6309   scaffold_3: 22842268-22848576
Thecc1EG017007 (1 of 1) PTHR10857:SF28 - E3 UBIQUITIN-PROTEIN LIGASE RGLG1-RELATED T. cacao v1.1 5019   scaffold_4: 1343780-1348798
Araha.2759s0003 (1 of 1) KOG1327 - Copine A. halleri v1.1 2755   Scaffold2759: 16357-19111

108 Members

Protein Name Organism Name Cluster ID Cluster Name Same Organism Count Method ID Method Name
29633.m000935 R. communis v0.1 124070395 RING domain ligase2 3 5270 Rosid
30147.m013839 R. communis v0.1 124070395 RING domain ligase2 3 5270 Rosid
orange1.1g015418m C. sinensis v1.1 124070395 RING domain ligase2 3 5270 Rosid
AT3G01650.1 A. thaliana TAIR10 124070395 RING domain ligase2 3 5270 Rosid
AT5G14420.1 A. thaliana TAIR10 124070395 RING domain ligase2 3 5270 Rosid
Ciclev10020205m C. clementina v1.0 124070395 RING domain ligase2 3 5270 Rosid
Lus10022294 L. usitatissimum v1.0 124070395 RING domain ligase2 4 5270 Rosid
Gorai.008G202700.1 G. raimondii v2.1 124070395 RING domain ligase2 4 5270 Rosid
Gorai.006G034900.1 G. raimondii v2.1 124070395 RING domain ligase2 4 5270 Rosid
Thecc1EG017007t3 T. cacao v1.1 124070395 RING domain ligase2 3 5270 Rosid
Cagra.3166s0047.1.p C. grandiflora v1.1 124070395 RING domain ligase2 3 5270 Rosid
Glyma.19G051500.1.p G. max Wm82.a2.v1 124070395 RING domain ligase2 8 5270 Rosid
Glyma.05G115700.1.p G. max Wm82.a2.v1 124070395 RING domain ligase2 8 5270 Rosid
Glyma.08G130800.1.p G. max Wm82.a2.v1 124070395 RING domain ligase2 8 5270 Rosid
Glyma.06G175700.1.p G. max Wm82.a2.v1 124070395 RING domain ligase2 8 5270 Rosid
Brara.C00624.1.p B. rapa FPsc v1.3 124070395 RING domain ligase2 6 5270 Rosid
Brara.G02741.1.p B. rapa FPsc v1.3 124070395 RING domain ligase2 6 5270 Rosid
Medtr6g021730.4 M. truncatula Mt4.0v1 124070395 RING domain ligase2 4 5270 Rosid
SapurV1A.1481s0050.1.p S. purpurea v1.0 124070395 RING domain ligase2 4 5270 Rosid
Eucgr.B00181.1.p E. grandis v2.0 124070395 RING domain ligase2 3 5270 Rosid
Prupe.5G163100.1.p P. persica v2.1 124070395 RING domain ligase2 3 5270 Rosid
Manes.15G152500.1.p M. esculenta v6.1 124070395 RING domain ligase2 5 5270 Rosid
Tp57577_TGAC_v2_mRNA31572 T. pratense v2 124070395 RING domain ligase2 3 5270 Rosid
Tp57577_TGAC_v2_mRNA6419 T. pratense v2 124070395 RING domain ligase2 3 5270 Rosid
Phvul.004G061800.1.p P. vulgaris v2.1 124070395 RING domain ligase2 4 5270 Rosid
Phvul.001G255900.1.p P. vulgaris v2.1 124070395 RING domain ligase2 4 5270 Rosid
Phvul.002G258600.1.p P. vulgaris v2.1 124070395 RING domain ligase2 4 5270 Rosid
Potri.008G183600.3.p P. trichocarpa v3.1 124070395 RING domain ligase2 4 5270 Rosid
Potri.001G342200.3.p P. trichocarpa v3.1 124070395 RING domain ligase2 4 5270 Rosid
Potri.012G090100.2.p P. trichocarpa v3.1 124070395 RING domain ligase2 4 5270 Rosid